KEGG   Bifidobacterium animalis subsp. lactis Bi-07: W91_0842
Entry
W91_0842          CDS       T02080                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bls  Bifidobacterium animalis subsp. lactis Bi-07
Pathway
bls03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bls00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    W91_0842 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bls03400]
    W91_0842 (ruvB)
Enzymes [BR:bls01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W91_0842 (ruvB)
DNA repair and recombination proteins [BR:bls03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     W91_0842 (ruvB)
    RecFOR pathway proteins
     W91_0842 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA TIP49 AAA_5 AAA_16 Mg_chelatase AAA_14 Zeta_toxin AAA_3 nSTAND3 AAA_33 TsaE RNA_helicase AAA_17 NTPase_1 AAA_18 Rad17 POTRA_2 AAA_25 Sigma54_activ_2 NB-ARC IstB_IS21
Other DBs
NCBI-ProteinID: AFJ18132
Position
complement(948216..949307)
AA seq 363 aa
MAIANMEPMEYSGADNLDARDESLRMVSAVPVGNEPVSDEELRPHVLEGFIGQPRLKAQL
QLFLDAARKRDVAPDHILMAGPPGLGKTTLAMIVANELGVPIRVTSGPAIQHAGDLASIL
SSLDVGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGAT
TREGMLPSPLRARFGFTAHLDFYPHEELEKLIERSASVLGLPLEDQAARQLSLRSRGTPR
IANRLLRRVRDWAIVHDLDSVGADDVKDALALYQIDSEGLDRLDIAVLNAIVRQFNGGPV
GLNNLSAMVGEEAETVETVCEPYLVREGFLIRTPKGRLATAKAWEHLGLKPDDGTPDDVS
KLF
NT seq 1092 nt   +upstreamnt  +downstreamnt
gtggcaatcgcgaacatggagccaatggagtattccggagccgacaacctcgatgcccgg
gatgaatcgttgcgcatggtgtcggccgtgccggtcggcaatgaaccggtgagcgacgag
gagctgcgtcctcatgtgttggagggcttcatagggcaacccagactgaaggcccagctg
cagcttttccttgatgctgcccgcaaacgtgatgtggctcctgatcacatcctcatggcg
ggtcctcccggcttgggcaagaccacattggccatgattgtggccaatgagcttggggtg
cccatccgggtcacgtcgggaccggcgattcaacatgctggagatctggcttcgattctc
agttcgctggatgtgggcgaagtgttgttcatcgatgagattcaccgacttccacgcgcc
gcggaggaactgctgtatatagccatggaggatttccgcgtggatgtgatggtgggcaag
gggcctggtgcctcttctattccactgacgctgcctcggttcaccgtcatcggagccacc
actcgcgaaggcatgctcccctcaccgctgcgcgcccgattcggcttcaccgcgcatctg
gatttctaccctcacgaggaactggaaaaactcatcgaacgctctgcctccgtgcttggc
ctcccattggaggatcaggctgcgcgacagttgtcgctgcgctcacgcggcacaccacgt
attgcgaaccgtttgcttcggcgagtgcgcgactgggctatcgtgcacgatctcgacagc
gtgggggcggacgatgtcaaagacgcactggctctctaccaaatcgattccgaaggactg
gaccgcctggacatcgccgtgctcaatgcaattgtccggcagttcaacggtggcccggtg
ggtctcaacaacctatccgccatggtgggggaggaggccgagacagtggagactgtatgc
gaaccgtatctggtacgtgaaggcttcctgattcgcaccccgaaaggccgtctcgccacc
gccaaggcatgggagcatttgggtctcaaacccgacgacggtacccccgatgatgtcagc
aagctattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system