KEGG   Blattabacterium sp. (Nauphoeta cinerea): K645_2461
Entry
K645_2461         CDS       T02863                                 
Name
(GenBank) Transcription Termination Factor Rho
  KO
K03628  transcription termination factor Rho
Organism
blu  Blattabacterium sp. (Nauphoeta cinerea)
Pathway
blu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:blu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K645_2461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blu03021]
    K645_2461
   03019 Messenger RNA biogenesis [BR:blu03019]
    K645_2461
Transcription machinery [BR:blu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     K645_2461
Messenger RNA biogenesis [BR:blu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     K645_2461
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 AAA ATPase_2 AAA_25 AAA_18 Mor Spore_III_AA SAP_new25 AAA_16 AAA_30
Other DBs
NCBI-GeneID: 17130817
NCBI-ProteinID: AGW86271
UniProt: U3Q844
Position
515392..517005
AA seq 537 aa
MFDITELKSKKLFELQEIARSSGLKKCTQLRKNELLEKIISIFNNKNTSDPLKKENPLKK
ENPLKKGFKMRKNTESKNSFKEKKNINGKKNIFKEYLKISNSKLPEESSTKFQKKHQNFS
NWKKNDRNNKNNKFEAQNISHRIEVGSQQKISSISSTNKYRTPEYEFEGIIISEGVLEIM
PENYGFLRSSDFNYLSSPDDIYVSQSQIRLFSMKTGDTIRGEVRPPKDGEKYFPLIKIIE
INGRSPSFVRDRDSFEHLTPLFPNEKFKLAEKNATLSTRIVDLFTPIGKGQRGMIVAPPK
TGKTTLLKEIANAIAANHSEVYLIILLIDERPEEVTDMQRNVKGEVIASTFDEPADRHVK
VANIVLQKAKRMVECSHDVVILLDSITRLARAYNTVAPASGKVLSGGVDANALHKPKRFF
GAARNIENGGSLSIIATAMIDTGSKMDEVIFEEFKGTGNKELQLDRKIANKRIYPAIDLV
SSSTRKDDLLLDSNTLQRMWILRKHLSDMNPVEAMEFLRSRMSRTKNNEEFLISMNG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgtttgatattactgaattaaaaagtaagaaactttttgaattacaggagatcgctcgt
tcatcaggattaaaaaaatgcacacaattacgaaaaaacgaactcctagaaaaaattatt
tccatttttaataataaaaatacttctgatcctttaaaaaaggaaaatcctttaaaaaag
gaaaatcctttaaaaaaaggatttaaaatgcgaaaaaatactgaatctaaaaattcattt
aaagaaaaaaagaacataaatggaaaaaaaaatatatttaaggaatatttaaaaatttct
aattctaaattaccggaagaatcttctacaaaatttcaaaaaaaacatcaaaatttttct
aattggaaaaagaatgatagaaataataaaaataataaatttgaagctcaaaacatatct
cataggatagaagtaggatcacaacaaaaaatatcttctatttcttccacaaataaatat
cgtactcctgaatatgaatttgaagggatcataatcagtgaaggagtattagaaattatg
ccagaaaattatggatttttaagatcttccgattttaattatttatcatctcctgatgac
atttatgtttcacaatctcaaattagactttttagcatgaaaacaggagatacaataaga
ggagaagtacgtccccctaaagatggagaaaaatattttccactaattaaaattattgaa
attaatggaaggtctccctcttttgtcagagatagagattcttttgaacatttaactcca
ttatttccaaatgaaaaattcaaattagctgaaaaaaatgcaactctttctacaagaatt
gtagatctttttactcctataggaaaaggacagagagggatgattgtcgctcctcctaaa
acaggaaagactactttattaaaagaaatagccaatgctattgcggctaatcattctgaa
gtttatttgattatattattaattgatgaacgaccagaagaagtcacagatatgcaaaga
aatgtaaaaggagaagtcattgcatctacttttgatgaacctgcagatcgacatgttaaa
gttgctaatattgttttacaaaaagcaaaaagaatggtagaatgttcacatgatgtagtt
atattattagattctattacacgtttagcacgtgcttataatactgttgctcctgcatct
ggaaaggtattatcaggaggagtagacgcaaatgcattacataaaccaaaaagatttttt
ggagctgctagaaatatagaaaatggaggatctttatctataattgctacagctatgatc
gatactggatcaaaaatggatgaagtaattttcgaagaatttaaagggacaggaaataaa
gaacttcaattagataggaaaatagctaataaacgaatttatccagctattgatcttgtt
tcttctagtacgagaaaagatgatcttttacttgattcaaacacattacaaagaatgtgg
attttacgaaaacatctttctgatatgaatccagtagaagctatggaatttttaagatct
agaatgtctagaactaaaaataatgaggagtttttaatatctatgaatggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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