KEGG   Bifidobacterium longum BXY01: GS08_07800
Entry
GS08_07800        CDS       T03387                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
blx  Bifidobacterium longum BXY01
Pathway
blx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:blx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GS08_07800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blx03021]
    GS08_07800
   03400 DNA repair and recombination proteins [BR:blx03400]
    GS08_07800
Enzymes [BR:blx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GS08_07800
Transcription machinery [BR:blx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GS08_07800
DNA repair and recombination proteins [BR:blx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GS08_07800
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AIF91011
UniProt: A0A2N0THX5
Position
1787732..1788016
AA seq 94 aa
MAFGTDPTPDGLANPPIDDLMKHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLV
EYQNNEKPLSIAFREIDEGLLEETLGEDDANEGN
NT seq 285 nt   +upstreamnt  +downstreamnt
atggcttttggtactgacccgacacccgacggtcttgcgaacccgccgatcgacgatctg
atgaagcacgccgattccaagtacgcgctggccattttcgccgctaagcgcgcacgccag
atcaactcctacttcacgcagctcaacgagggcctgctgcagaacgtcggcccactggtc
gaataccagaacaacgagaagcctctgtccatcgccttccgcgagatcgacgagggtctg
cttgaggagaccttgggcgaggacgacgccaacgagggcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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