KEGG   Burkholderia mallei 2000031063: DM57_1766
Entry
DM57_1766         CDS       T03522                                 
Name
(GenBank) RNA polymerase subunit sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bmai  Burkholderia mallei 2000031063
Pathway
bmai02020  Two-component system
bmai02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bmai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DM57_1766
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DM57_1766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmai03021]
    DM57_1766
Transcription machinery [BR:bmai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DM57_1766
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF2344 HTH_IclR HTH_38 HTH_Crp_2 HTH_23 TRF
Other DBs
NCBI-ProteinID: AIO82506
Position
1:complement(1568468..1569976)
AA seq 502 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAIAQNPLLENDDDWIASPLRV
AADGSVIAQTPASSAPEPMAGAPNGTAATNERTERDETAGVDEYDSYSADGGDASQWNLD
DFGRSPAASDDDDLPPMQIHETSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDDGYL
SASLEEVLADLPAELEVDVDELNAALALVHSFDPAGVGARSASECLKLQLLRLDPSPTRA
LALDIVSQHLELLAARDFTRLRKQLKATDDALRDAHALIRSLEPFPGAAYGKAEADYVVP
DIIVKKAGQNWQAELNPEVVPKLRINNLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQ
QRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPF
GTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVA
RRTVAKYREALKIPAVNLRKSL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaaagccagtcttcaacttcgcctgtcgcagcatctcgcgctcacgccccagcttcag
cagtcgatccggctgttgcaactgtcgacgctcgaactgcaacaggaagtcgcgacggcg
atcgcgcagaacccgctgctcgagaacgacgatgactggatcgcgagcccgttgcgcgtc
gcggccgacggctcggtgatcgcgcagacgcccgcgtcgtccgcgcccgagccgatggcg
ggcgcgccgaacggcacggctgcgaccaatgagcgcaccgagcgcgacgaaaccgccggc
gtcgacgaatacgacagctattcggccgacggcggcgacgcgagccagtggaacctcgac
gacttcggccgctcgcccgccgcgtccgacgacgacgatctgccgccgatgcagatccac
gagacgtcgacgtcgctgcgcgatcatctgatggcgcagttgcgcgtcacgcaggcgagc
ccgcgcgatcgcgcgctcgtcacgttcctgatcgaatcgctcgacgacgacggctacctg
agcgcgtcgctcgaggaagtgctcgccgatctgccggcggagctcgaggtcgacgtcgac
gaactgaacgcggcgctcgcgctcgtgcacagcttcgatccggcgggcgtcggcgcgcgc
tccgcgtccgaatgcctgaagctgcagttgctgcgcctggatccgtccccgacgcgcgcg
ctcgcgctcgatatcgtgtcgcagcatctggagctgctcgccgcgcgcgatttcacgcgc
ctgcgcaagcaactgaaggcgaccgacgacgcgctgcgcgacgcgcacgcgctgatccgc
tcgctcgagccgttccccggcgcggcgtacggcaaggccgaagccgattacgtggtgccc
gacatcatcgtgaagaaggccggccaaaactggcaggcggaactcaatccggaagtggtg
ccgaagctgcggatcaacaatctttacgcgaacatcctgcgcaacagccggggcgatccg
agcgcgggatcgctgaagcaacagcttcaggaagcgcgctggctgatcaagaacattcag
cagcggttcgagacgatcctgcgcgtcgcgcaggcgattgtcgagcgtcagaagaatttc
ttcgcgcacggcgaaattgcgatgcgccccttggttttgcgggaaatagctgatacgctg
ggcctacacgagtcgactgtctcccgtgtgacaaccggcaagtacatgctgaccccgttc
ggcacacttgaatttaagtacttcttcggatcgcacgtatcgacagacaccggaggtgcc
gcgtcgtcgacagcgatccgcgccctcatcaaacaactgataggagccgaagaccccaaa
tcccctctttcggacagtcgcatagccgagctgctagcggaacaagggttcgtggtcgcg
cgccgcacggttgccaaatatcgcgaagccctcaagatcccggcggtgaatctgcgcaag
tctctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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