KEGG T03323: DM55

Burkholderia mallei 23344: DM55_1100

Entry

DM55_1100         CDS       T03323

Symbol

uvrA

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

bmal Burkholderia mallei 23344

Pathway

bmal03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:bmal00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DM55_1100 (uvrA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmal03400]
    DM55_1100 (uvrA)
DNA repair and recombination proteins [BR:bmal03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DM55_1100 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DM55_1100 (uvrA)

SSDB

Motif

Pfam:

UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 DnaJ_CXXCXGXG nSTAND3 AAA_21 RsgA_GTPase AAA_22 BCA_ABC_TP_C APS_kinase AAA_25 cobW Viral_helicase1

Other DBs

NCBI-ProteinID:

AIO52667

Position

1:complement(1210217..1213084)

AA seq 955 aa
MEQIRIRGARTHNLKNVNLDLPRHKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETRLMILAPVVANRKGEHAELFDEMQAQGFVRFRVR
SGGGAANEGAAKIYEVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDREHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAFEDLPEKIRKILLYGSG
KQTILFSYINERGRTTIREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPSCDGT
RLRREARFVRVGQGDYARAIFEVSSWPLRDALGYFDGLTLDGAKREIADKVIKEIVARLT
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMIRTADYVVDMGPGAGEHGGMIVAEGTPKQVQANGDSLT
GQYLVGKRTIEYPDERISPDPQRMLRIVDAHGNNLKHVDLDLPVGLLTCITGVSGSGKST
LINDTLYNAVARHLYGSATEPAPHESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFT
PIRELFAGVPASKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGK
RYNRETLEVQYKGRNISEVLDMTVEHAYEFFSAVPVVARKLKTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIE
HNLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKTKASFTGKYLAPLLKRKK

NT seq 2868 nt +upstreamnt +downstreamnt
atggaacaaattcgtatccgtggggcgcgcacccacaacctgaagaacgtcaatctcgac
cttccgcggcacaagctgatcgtgatcaccgggctctcgggctccggaaaatcctcgctc
gcgttcgacacgctgtacgccgaagggcagcggcgctacgtcgaaagcctgtcggcctat
gcgcgccagttcctgcagttgatggagaagcccgacgtcgacctgatcgagggcctgtcg
cccgcgatctcgatcgagcagaaggcgacgtcgcacaatccgcgctcgacggtcggcacc
gtcaccgagatccacgactacctgcggcttttgtacgcacgggtcggcacgccctactgc
ccggatcacgaaattccgctcgaggcgcaaagcgtgtcgcagatggtggacgcggcgctc
gcgctgcccgaggaaacccggctgatgatcctcgcgcccgtcgtcgcgaaccgcaagggc
gagcacgcggagctgttcgacgagatgcaggcgcagggcttcgtgcgctttcgcgtgcgc
tcgggcggcggcgcggcgaacgaaggcgccgcgaagatctacgaagtcgattcgctgccg
aagctcaagaagaacgacaagcacacgatcgacgtcgtcgtcgaccgcctgaaggtgcgc
ccggacatgaagcagcggctcgccgaatcgttcgagaccgcgctgcgcctggccgatggc
cgcgcgatcgcgctcgagatggataccgaccgcgagcacctgttcagctcgaagttcgcg
tgcccgatctgctcgtactcgctgcaggagctcgagccgcgcctgttctcgttcaacaac
ccgatgggcgcgtgcccggaatgcgacggcctcggccagatcaccttcttcgatccgaag
cgggtcgtcgcgcacccgtcgctgtcgctcgccgcgggcgcggtcaagggctgggaccgc
cgcaaccagttctacttccagatgctgcaaagcctcgcggcgttctacgatttcgacatc
gacaccgcgttcgaggatctgcccgagaagatcaggaagatcctgctgtacggctccggc
aagcagacgatcctgttctcgtacatcaacgagcgcggccgcacgacgatccgcgagcac
gtgttcgaagggatcattccgaacctcgagcgccgctaccgcgaaaccgattcggccgcc
gtgcgcgaggaactcgcgaagtaccagaacaaccagccgtgcccgtcgtgcgacggcacg
cgcctgcgccgcgaggcgcgcttcgtgcgcgtcggccagggcgactacgcgcgcgcgatc
ttcgaggtgagcagctggccgctgcgcgacgcgctcggctacttcgacggcttgacgctc
gacggcgcgaagcgcgagatcgccgacaaggtgatcaaggaaatcgtcgcgcggctcacg
ttcctgaacaacgtcggcctcgattacctgtcgctcgagcgcagcgccgagacgctctcc
ggcggcgaggcgcagcgcatccggctcgcgtcgcagatcggttcggggctgaccggcgtg
atgtacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaacgatcgcctgatc
ggcacgctcaagcatctgcgcgacctcggcaactcggtgatcgtcgtcgagcacgacgag
gacatgatccgcacggccgactatgttgtcgacatgggccccggcgcgggcgagcacggc
ggcatgatcgtcgccgaaggcacgccgaagcaggtccaggcgaacggcgattcgctcacg
ggccagtatctcgtcggcaagcgcacgatcgaatacccggacgagcggatctcgcccgat
ccgcagcgcatgctgcgcatcgtcgacgcgcacggcaacaacctgaagcacgtcgatctc
gatctgccggtcggcctgctgacctgcatcaccggcgtgtcgggctccggcaagtcgacg
ctcatcaacgatacgctgtacaacgcggtcgcgcgccacctgtacggctcggcgacggag
ccggcgccgcacgagtcgatcgagggcctcgagcacttcgacaaggtcatcaacgtcgat
caatcgccgatcggccgcacgccgcgctcgaacccggccacctacacgggcctgttcacg
ccgatccgcgagctgttcgcgggcgtgcccgcatcgaaggagcgcggctacgatccgggc
cgcttctcgttcaacgtgaagggcggccgctgcgagtcgtgccagggcgacggcgtgctg
aaggtcgagatgcacttcctgcccgacgtctacgtgccgtgcgacgtgtgccacggcaag
cgctacaaccgcgagacgctcgaagtgcaatacaagggcaggaacatcagcgaagtgctc
gacatgacggtcgagcacgcgtacgagttcttcagcgcggtgcccgtggtcgcgcgcaag
ctgaagacgctgctcgacgtcggcctcggctacatccgcctcggccagtcggcgacgacg
ctctcgggcggcgaggcgcagcgcgtgaagctgtcgctggagctctccaagcgcgacacg
ggcagaacgctctacatcctcgacgagccgacgaccggcctgcacttccacgacatcgcg
ctgctgctcgaggtgatccaccggctgcgcgaccagggcaacacggtcgtgatcatcgag
cacaacctcgacgtgatcaagacggcggactgggtgatcgacctggggccggaaggcggc
gcgggcggcggccagatcatcgcgcagggcacgcccgagcaggtcgcgaaaacgaaggcg
agcttcaccggcaaatacctcgcgccgctcctgaagcgcaaaaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

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