KEGG   Burkholderia mallei 23344: DM55_4147
Entry
DM55_4147         CDS       T03323                                 
Name
(GenBank) DEAD_2 family protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bmal  Burkholderia mallei 23344
Pathway
bmal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DM55_4147
  09124 Replication and repair
   03420 Nucleotide excision repair
    DM55_4147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmal03021]
    DM55_4147
   03400 DNA repair and recombination proteins [BR:bmal03400]
    DM55_4147
Enzymes [BR:bmal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     DM55_4147
Transcription machinery [BR:bmal03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DM55_4147
DNA repair and recombination proteins [BR:bmal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DM55_4147
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 HBB
Other DBs
NCBI-ProteinID: AIO53767
Position
2:1114387..1115874
AA seq 495 aa
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAA
LAHDVCPYYLAQELARWCDVVVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRA
RGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDREQAGAYVVHPDVPQRVLSAA
QNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAE
QLTVKVASHVSTRWRDRERSLEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERH
PALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAFSEGVDLAGDRLIGAFVATLG
LPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
RGEVRRLLPRWWRLS
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtgctgccgctgcgggtgctcgagctcgtcgcgcgcgacaaggcgtgcgagcacccggac
gcggcgtgtcacggcgaatcgtgcccgctcgcgcgcggcttctacgatcggctcgcggcc
gcgcgcgccgccgcgctcgaacatgggcggctcgatcgtgcggccgtgcgcgcggccgcg
ctcgcgcacgacgtgtgcccgtactatctcgcgcaggaactggcgcgctggtgcgacgtc
gtcgtcggcgactacaacaactactacgacggcagcgcgctgctgcacgcgctcacgttg
cagaaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgcg
cgcgggatgtacagcgcggcgctcgaccagcgcgagctcgccggcgtgcgcaagctcgcg
cccgcgccgctcgcgaaggcgctcgagcgcctgaatcgcgaatggaatgcgctcgatcgc
gaacaggcgggggcgtacgtcgtgcatccggacgtgccgcagcgcgtgctgtcggccgcg
cagaacctgatcgggtgcttctcggagttcgcggcgcaggcgccgctcgcgctcgacgac
gcggtgctgcgcttctgtttcgacgcgatccatttcgtcgcgctcgccgagcagttcggc
acccattcgatcttcgacgcgacgcgcgtgcgcgcgggcgcgccgcgccgcggcggccat
gcgtcgatcctctgcgtgcgcaacgtgattcccgccgacttcctcgcgccgcgccacggc
gccgcgcgcgcgaccgtgatgttctcgggcacgctcagcccgttcgatttctaccgcgac
acgctcgggctgccgggcgataccggcacgctcgacgtcgaggggccgtttcgcgcggag
caactgacagtgaaggtcgcctcgcatgtgtcgacgcgctggcgcgaccgcgagcgctcg
ctcgagccgatcgtcgagctgatcgccgagcagtacgcggcgcggccgggcaattacctc
ggattcctgagcagcttcgagtatctgcagcaagtggtcgcgcggctgcgcgagcgccat
ccggcgctgcccgtctgggagcaggcgcccggcatggacgaggtcgcgcgtgacgcgttt
ctcgcgcgcttcgagccgaacgggcggggcatcggcttcgcggtgctgggcggtgcgttc
tcggaaggcgtcgatcttgccggcgaccggctgatcggtgcgttcgtcgcgacgctcggg
ctgccgcaggtcaacggcgtcaacgaggagatgcgtcgcgcgatggacgcgcgcttcggc
agcggctacgactacatctacctgtttccggggctgcgcaaggtcgtgcaggcggcaggg
ggggtgattcgcaccgagcacgacgagggcgtgctgcatctgatcgacgaccgcttccgc
cgcggcgaggtgcggcggctgttgccgcggtggtggcggctgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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