KEGG   Bombyx mandarina (wild silkworm): 114241311
Entry
114241311         CDS       T05882                                 
Name
(RefSeq) ribonuclease Z, mitochondrial
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
bman  Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:bman00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bman03016]
    114241311
Enzymes [BR:bman01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     114241311
Transfer RNA biogenesis [BR:bman03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    114241311
 Prokaryotic type
    114241311
SSDB
Motif
Pfam: Lactamase_B_4 Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 114241311
NCBI-ProteinID: XP_028027902
UniProt: A0A6J2JFS0
Position
Unknown
AA seq 1071 aa
MPKAQTARIMEIQRGRQNFSKKSEKYSPSTVYLQVLGSGARGVPNTLYLFSDQKRYLFNC
GESTQRLAHEHKVKLSRLEHIFITSKTWRNIGGLPGLSLTLQDVGVPNITLHGPEGLDEL
YNATKRFVIMKEMNVAMAKCSPSEDFEDSVMSVKYVLLGPHESLLAKDPKPTTKKPKLDT
NTDKQFEEFIHDDTDYYRNEIRNAEAKNKVASKEKNKTRTSPEKDQIKKKTDKVLHDLQK
QPHCSVAYICTLKRRLGTLDLAKCVERGVKPGPLLGQLKNGEDVVLPDGTLVLSKDVKTP
DDPGPVFIVMEVPEISYLKESEFSAHFDDGKNPVENVPAIIVHYSPPNVFNHPTYRAFLS
KFGPTTRHLILNTQNSCLGSEAVHRTQHKLHLLDPDIFPLLKDVSVPAVWNAQPPVPKTG
SPVRLKELEELKNKIAFAQFQNIINMEGSCKGDGMLNIDDGSKLELVAGRTLTMHYLRPH
KQVDRSAEPKLHIQDYIQETMDVDGFVSSLEQFRHVVEGIRYNNGAQKEYPKLVFLGTGS
CIPSKTRNTSCFVLHVDEHNSIVLDCGEGSFGQMVRFYGPKKVNAFLRTVKAIYISHLHA
DHHIGLIGLLQARREAFEESSTTPEAAYLLAPGQIVSWLSVYNQQFERIQNDYTLIPNQS
LLYDSNTEEMTSAILARIGVQAIKTCLVSHCPNAFGVTIDLDGTHKITYSGDTLPCEELI
KIGENSTLLIHEATMEDELAVEARMKMHSTTSQAIAAGRQMRAAYTLLTHFSQRYARLPR
LSARMLTDNRSVGVAFDNMQVTMSDLALLPHMYAPLQLMFAEHCVEMEMKAASRAKQKER
RISTHSFQPEEKAESVQSDRGQHRKSTRSRAASSSPTARARYRESNASRLRQEIKGMTVS
GVIGRVPRSKSSSPVKSCYTRTVSNTSNSSAVQHERLNVRHNVSTGHIVDTRSKTLNSVA
RMPSKEVVEVLLTNVNRKINSANVPTVPIPSTEVCEHRSPLTVKKREAPKSTPPRSLCRS
PSLSPRSNKLIKLSDTRPQDARSFPVYNKLRSTKQEYPNEMKSWMIPSNIS
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccaaaagcacaaacagctcgaataatggagatacaaagaggcagacagaacttctca
aaaaagtctgaaaaatattcccctagtactgtgtatcttcaagttttaggatctggagct
cgtggagtgccgaacacactgtaccttttttctgatcagaaacggtatctattcaactgt
ggagaatctactcagcgcttagcacatgaacataaggtgaaactgtccagacttgagcat
atcttcatcacaagcaaaacttggagaaacattggaggcttgccgggactgtcacttaca
ttacaagatgttggagtaccgaatataacattgcacggtcctgagggattggacgaactg
tataatgccacaaaaaggtttgtgataatgaaagaaatgaatgtggctatggccaaatgt
agtccaagcgaagattttgaagatagcgtcatgagtgttaaatatgttttactcggccct
catgaaagtctactagctaaagatccaaaaccgacaacaaaaaaacctaaattagataca
aatacagataagcaatttgaagagttcattcacgatgatacagactattatagaaatgaa
atacgcaatgccgaagctaaaaataaagtggcatctaaagaaaagaacaaaactagaaca
agccctgaaaaagatcagatcaagaaaaaaactgataaagttctacatgatcttcaaaag
caaccgcattgctcagtagcgtacatctgtacacttaagagacgcctaggcaccttagat
ctggccaaatgcgtggaacgcggagttaagccaggacctctacttggtcagctcaaaaac
ggagaagacgtggtactccctgacgggactcttgtactgtccaaagatgtcaaaacacct
gatgatcccggacctgtatttattgtaatggaggtaccagaaatatcatatttaaaggaa
tcagaattctcagctcactttgacgacggaaagaatcctgttgagaacgtaccggcaata
attgttcactattcaccgccgaatgtgttcaatcatcccacttaccgtgccttcctctcc
aagttcggacccacgacgcggcatctgatcctgaacactcagaactcttgtctcggctcg
gaagctgttcaccgaactcagcacaaactgcatctactggacccggatatattcccttta
ctgaaagacgtcagtgtgccggctgtgtggaacgctcaacctcccgtgcccaagaccggc
agtcctgtcagacttaaagaattggaggaattgaaaaacaagatcgcctttgcccagttc
cagaacataataaacatggagggttcgtgcaaaggagatggcatgttgaacattgatgac
gggtcaaaactagaattagtggcgggcagaacactcaccatgcactatctaaggccacac
aagcaagttgacagatcagccgaaccaaaactccacatacaagactacatccaagagacg
atggacgtggacgggttcgtcagcagcctcgagcaattccggcacgtggtcgaagggatc
cggtacaacaacggtgcacagaaggaatacccgaagctcgtcttcttgggcaccggttcc
tgtatacccagcaagacgaggaacaccagctgctttgtgcttcatgtcgacgaacacaat
tcaatagtgttggactgcggtgaaggttcgttcggtcaaatggtcaggttctatggaccg
aagaaagtcaatgccttcttgaggacggtgaaggctatttacatttcacatcttcacgct
gaccatcatatcggtctaataggactactgcaagcccggcgagaagctttcgaagaatcc
tccacgacccccgaggccgcgtacctactagcgcccggccagatcgtgtcctggctgtcc
gtctacaaccaacagtttgagaggatacaaaatgactatacgctaatacctaatcagagt
ttgctttacgatagtaacacagaggaaatgacgtcagcaatcctagccaggataggagtt
caagctatcaaaacgtgcttagtatctcactgccccaacgccttcggagtcaccatagac
ttggacgggacgcacaagatcacatattcgggcgacactttgccctgtgaggaactaatt
aaaattggtgagaattcaaccctgttgatccacgaagcgactatggaggacgagctggcg
gtggaggcgcggatgaagatgcactcgacgacgtcgcaggcgatcgcggcgggccggcag
atgcgcgccgcctacacgctgctcacgcacttcagccagcggtacgcgcgcctgccgcgg
ctcagcgcgcgcatgctcaccgacaaccgcagcgtcggcgtcgccttcgacaacatgcag
gtgacaatgagcgacttggccctgctgccgcacatgtacgcgcctctgcagctgatgttc
gcggagcactgcgttgagatggagatgaaggcagccagccgagccaagcagaaggagagg
agaatatcgacgcacagcttccagcccgaagagaaagcggagagtgtccagtcggatcgc
ggacaacaccgcaagagtacgcgcagtcgcgccgcgtcgtcgtcccccaccgcgcgggcc
agatacagggagagcaacgcgtcccggctcagacaagagatcaagggcatgacagtgtcc
ggtgtgatcggaagagtgccgcgcagtaaatcgtcatccccagtcaagagctgttacact
cgtacagtaagcaacacgtcgaactctagcgctgttcaacacgagagactaaatgtcaga
cacaacgtatcgacgggacacatcgtcgatacacgttcgaaaacgttaaactctgtcgcg
aggatgccgagcaaagaagttgtcgaggtattgctaacaaacgttaacagaaagattaac
tctgcgaacgtgccaactgttccgattccatccacggaggtctgtgaacatcgttcgccg
ctaacagtgaagaaaagggaggcgcctaaatcgacaccaccaagatctctttgccgttct
ccgtcactcagtccaaggtctaataaactcattaagctatcagacactaggccacaagac
gcgagaagttttcctgtatacaacaagttacggtcgacaaaacaagaataccctaatgaa
atgaagagctggatgataccaagtaatatttcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system