KEGG   Bombyx mandarina (wild silkworm): 114244865
Entry
114244865         CDS       T05882                                 
Name
(RefSeq) nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114244865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114244865
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114244865
SSDB
Motif
Pfam: Nup188_N-subdom_III PMEI DUF4692
Other DBs
NCBI-GeneID: 114244865
NCBI-ProteinID: XP_028032603
UniProt: A0A6J2JTK7
Position
Unknown
AA seq 1824 aa
MTTSSVNYWKRLWRWTTSESLTTEELTKIFDTKEVRDGLKIGLASYKQNKPEDFTKLQSQ
YPDQTKLLTIVQTLQNYIDVDCFQLWEILKNYLCDISYGTPESALKNVAFVDTRPTYLSP
KVWSFYYSERLFLLKLLQYIIQLKDDAQYKYQKEFTKIIEDIGIQNIKTSLISQFEKVLS
AAPPSRKILSDFSNDSVRHTWLESNLREQLAILQILLIIAEKNTFQAEEFKKLFNLFIKH
SFGKNYGFSEFLGERHREQCLCIMYMEVCLFMVIIDHVKIDNLSTWIENTKEVVETELTK
IQMCTEHSAMLLTWMLVTLQSDQHVKLFESQYQHFGSTAMKMKVFEFLQQMLNSPVFSDQ
SKCSQIAKQRMFNILNELCDKFDGDGSLSNQTGIIQLCSDLLQSPEIACQFWKLHQRDKD
FGVVSLWNTALEYFPHHFSPLSNLAAGLVQAGKNSVRNLISELKNLPVYAEIYNPNAVPL
VSIQYDDAIVGREYYPLGDPSYRIETGSKATIMERKEGTMIHFRTPYSYWTVFNSDIEKA
LDRKHHQYNVNAILQRVFEGARVLKGVLKSLVEEKEIPKALVESCEGVFDVLVRFMRADS
PPLLLLVECLEVCSALVPVFPKEIHLRLINAGLLPRIMNQKLTHIEYANGESFDSATVGS
YLVALEQPTGTYKFLSAYIDMLCTFHEASTEERVTKEIILPGLILLLREVLPNAYGWRYT
NIRDRRAMLQRCMRFLTLVLQDQKTDGSTALLKRTCVYSLLHTENALVLLKIISLGNEHL
ENMIQNETNWSSGTGSQFISIIQRCVAVLMFALRLKSLVTESNEMTPLEHLIFTQNKQKD
SLKVVPKVTSYINHVFNKSLAVLCCRLLKMFADSFQMSLFASLDMTAYQVRVLFLDRLRD
EYETTELKVAILEFVATCVGTQPGLTEAFFMMNYEKTNDDKKLKETDKDKEENLYNYESI
LGYMAEYLGTVKADAKQLQSPLLGCIMGLFHALWKNNMQILVKKLRETATFWDYMTSPLF
SEIQPGLRTYSQIFNVIGIELFVSRGKIENDLKLMLEQLFDTNKTHLDKWINHIFSFKGR
SENEPVDKVPVWLGLLTSWKDFTTIFCKTLPISLNIAHKAKMVTPCMTALLNELEDLKDG
RLVVMLAELYVIMLANWSHDCFENRKASAKQIDRLLTNTAIIYECLHPRAKKAILSICTV
AISGLDYEIKANSATAQSIIRSVTNLNSVELEKLFDDFKDLPKSDTKTTEPSTYEDVSPV
VLSLAMLEQCLELYDDMFSGLSQWFQSSRFINKLLCCLQMCLQSRRHYQTSLAALRCLTV
YSRGPFSKELLLSDIDQFLWMQLLPPKFDGVTWKPEEWWKVYSYSLDFISMMVMKHGQFF
ASDAITFVGVHLEHLIEAINLPRQVVSIDSLNVCASALNLIVQLVKYESRWRLQNMHSLF
GIMRSISACLYQCVIYMIRSRRTSDAAQPPSDDTPPTPSLLPRTLEVLHMSTLCLLSFSP
NLLSLLADPGLDLERWQPLVELHFGAPKLSYEPFPQLTFGTLVSAICLLTRSLNHAYHAE
ESSGSRSPRGGRRRVCSCSSPAESKRLNRSESLTSVSSAASALPGLDERLVGGALEATTT
LLAEQALLAVRDPNVPARHKQLVRRELCSELAQFHDFVRKRILCAAHARPHLVRNKLGAW
PLPSDEEEVKRIEEARKEVNSAADDEDQRSLPPPPPPKRASHDSMREYILRKHYLEKCAQ
TPTKGPPSPVSHSTPASDKKKETSRSSKRVSWAETTRDSDESLDSSLQEIEPVYSNLTDV
QINNEEDYFHFMSVVFLYICQTEL
NT seq 5475 nt   +upstreamnt  +downstreamnt
atgacaacgagtagtgtaaattattggaagaggctatggcgctggacaacttcggagagt
ctgactacagaagaattgaccaaaatttttgatacaaaagaagtaagagatggacttaaa
attggattggctagttacaaacaaaacaagcctgaggactttaccaaacttcagtcacag
tatccggatcaaacaaagctgctcactatagtgcagacacttcaaaattatattgatgtc
gactgttttcaattatgggaaatattaaaaaactatttgtgtgatatatcatatggtaca
cccgagagtgcattaaagaatgttgcatttgttgacacccgacctacatatttgtctccc
aaagtatggagcttctattattctgagcgactctttctactcaaattgcttcagtacatc
attcagcttaaagatgatgctcaatataaatatcaaaaggaattcaccaagattattgaa
gatattggcatacaaaacattaaaacctcactcatatctcaatttgaaaaggtcttaagt
gctgctccaccatctagaaaaatattgagtgatttttctaatgattctgtgcgacacact
tggttagagagtaatttgagagaacaattagcaatacttcaaatactcttaataattgcg
gaaaagaacacatttcaagctgaagaattcaaaaaattgtttaatttgttcataaaacac
agttttgggaagaattatgggttcagtgagttcctgggagaaagacacagagagcaatgc
ctctgtattatgtacatggaagtttgcctgtttatggtcattattgatcatgtgaaaatt
gataatttatcaacatggatagaaaatacgaaagaagttgtagaaactgaattgacaaaa
attcaaatgtgtacagaacatagtgccatgcttttgacgtggatgctggtaacgttgcag
agtgatcaacatgtaaaattatttgaaagccaatatcaacattttggcagtactgcaatg
aagatgaaagtgtttgagtttcttcaacagatgctgaacagtcctgtattctcagatcaa
tcaaagtgctcacaaatagctaaacaaagaatgtttaatattctcaacgagctttgtgac
aagtttgatggagacggaagcctcagcaatcaaactggcattatacagctgtgttcagac
ctgcttcagtcaccagaaatagcttgtcaattctggaaacttcatcagagagacaaagac
tttggtgtagtgtcattatggaatactgcactagaatatttccctcatcattttagtcct
ctctcaaatttagctgctggcttagttcaagctggtaagaacagcgtcagaaatctaata
tctgaattgaaaaatttacctgtatacgcggaaatatacaatccaaacgcagtaccactg
gtatctatacaatacgatgacgctatagtcggcagagagtactaccctctgggagatccg
tcttatcgcattgaaactggctccaaagccacaatcatggaaaggaaggaaggcaccatg
atccacttcagaacaccttattcatattggacggtgttcaacagcgatatagaaaaagcc
ttagacagaaaacatcatcagtacaacgtcaatgcgatattgcagagagtttttgaaggt
gcgagagtattaaagggtgtactcaagtcgctggttgaggagaaagagatcccaaaggcg
ttggtagaatcatgtgaaggagttttcgatgtactagtaaggtttatgagggctgattct
ccgcctctgctacttttggtggaatgccttgaagtatgttctgcgctggtgccagttttc
ccgaaagaaattcatttaagattgataaacgcaggtctgttaccacgcatcatgaatcag
aaactgacgcatatagagtatgccaatggcgaatcgtttgattcagctaccgttggatcc
tatttagttgcactagaacaacctacaggaacatacaagttcctatctgcgtatattgat
atgctttgcacttttcatgaggcatcgaccgaagaacgtgttaccaaagaaataattctg
cccggattgatcctgctactgcgcgaagtgttgccaaacgcatacggctggcgctacacg
aacatacgggaccggcgcgccatgctgcagcgctgtatgcgcttcctgaccttagtgttg
caagaccagaaaacagatggcagcaccgcgctgttgaaacggacctgtgtgtatagttta
ctgcacactgaaaacgctttggtgctactcaagattatttcactgggaaatgaacattta
gagaacatgatacaaaatgaaacgaactggtcatccggtacgggttcacagtttatatcg
ataatacagaggtgcgtggcggtgctcatgttcgctttgcgtctcaagagtctcgtcacg
gaatccaacgagatgacgccgttggaacatctcatattcactcagaataaacagaaagat
tcattgaaagttgtacccaaagtgacaagttatatcaatcatgtgttcaacaaaagcttg
gccgtgttgtgctgtaggctcttgaagatgtttgccgatagtttccagatgtcgttgttc
gcgtcgttggacatgaccgcgtaccaagtgcgggtgttgttcctcgatcgacttcgcgac
gagtacgaaacgacagaactaaaagtggccatactagagttcgtggccacgtgcgtgggc
acgcagcccggcctcaccgaagcgttcttcatgatgaactacgaaaaaacgaatgacgat
aaaaaactcaaggaaaccgataaagataaggaggaaaacctgtacaactacgaaagcatc
ctcggttatatggcggagtacttgggaactgtgaaggctgatgcgaaacaacttcaaagt
ccgctcttagggtgcataatgggtctgttccatgctctatggaagaacaatatgcagatt
cttgtgaaaaaattacgcgaaaccgcaacattttgggattacatgaccagtccactcttc
agtgagatacagcccggcttgagaacttattcgcaaatattcaacgttatcggcatagaa
ctattcgtctctcgagggaaaatagaaaatgacttgaaactgatgctcgagcaattgttt
gataccaacaaaacccatttggacaaatggatcaaccatatattttcgtttaaaggtaga
agcgaaaatgagcctgtcgataaagtgccggtctggcttggattgttaacctcttggaaa
gatttcaccacgatattttgcaaaaccttaccgataagtttgaatatagcgcacaaagcg
aaaatggtcaccccctgcatgaccgccttgttgaacgaactcgaagatctgaaagacgga
aggctggtcgttatgttggccgaactgtacgtcataatgttggccaattggagccacgat
tgctttgaaaacagaaaagccagtgccaaacaaatcgatcgtttattaaccaacactgcg
attatatacgaatgcctccacccgagggccaaaaaagccatcctctccatctgcacagtc
gcgatcagcggtctcgattatgaaataaaggctaacagtgccaccgcgcaaagcattatt
agatccgtgaccaatttaaatagcgttgagttggagaaattgtttgacgatttcaaggat
cttcctaaatcggacacgaagaccaccgagccctcgacgtacgaggacgtatcgcctgtc
gttctatcattggcgatgttggaacagtgtctggagttgtacgacgacatgttctcggga
ctatcgcagtggttccagtcgagtcgattcataaacaagctcctgtgctgtttgcagatg
tgtttacagagccgtcgccattaccagacgtctctagcggcgttacggtgcctcaccgtg
tactcccgaggacctttctctaaggaactcttgctgagcgatatcgaccagtttttatgg
atgcaactgttgccgccgaaattcgacggcgtaacttggaagcccgaagaatggtggaaa
gtgtactcttacagcttagactttatatccatgatggtcatgaaacacggtcagttcttt
gcgagtgacgcgatcacatttgtcggggtccacttggaacatttgatagaggccataaac
ctgccacgacaggtcgtcagcatcgattcgttaaatgtatgcgcgtccgcgttgaatctt
atagttcaattagtgaagtacgaatctagatggcgcttacagaacatgcattcgcttttt
ggtattatgagaagtataagcgcgtgtctgtaccaatgcgtgatatacatgatccgatcg
cggcgtacctccgacgccgcgcagcctccaagcgacgacaccccgccgacgccgtcctta
ttgccaaggaccttagaagttctccacatgtcgacactgtgcttgctatcgttcagtccc
aatctgctgtcattgctcgctgaccccggactagatttggagagatggcagccattagtt
gaactacatttcggagcgcctaagttgtcttatgaaccattccctcaactaactttcggt
acattagtgtccgccatctgcttgttgacgagatcattgaaccatgcgtaccacgcggag
gagagcagcgggtcccggtccccgcgcggcgggcggcggcgcgtgtgctcgtgcagcagc
cccgcggagtccaagcggctcaaccgcagcgagtccctcaccagcgtgtcctccgccgcc
agcgcgctgcccggcctggacgagaggctggtcggcggcgcgctcgaagccaccactacg
ctgctcgcagaacaggcgctacttgcagtgcgcgatccgaatgtcccagctcgtcacaag
caactcgtccgccgggagctctgctctgaactagctcagttccatgatttcgtccgcaag
agaatattgtgcgctgcccatgcgcgcccgcacctcgtgcgcaacaagcttggagcttgg
ccgctcccttcagacgaagaggaagtcaaaaggatcgaagaagccaggaaagaggttaac
tccgccgccgacgatgaagaccagcgctcgttgcctccgcccccgccaccgaaacgagca
tcacacgattctatgcgcgaatacattttacgtaaacattacttagaaaaatgtgcacaa
acacccacaaaaggaccgccgtctcccgtctcacattcgacgcccgcgtccgataaaaag
aaagaaacatccagaagctcgaaacgggtttcttgggcggaaactaccagggacagcgat
gaaagcttagacagctctctccaagaaatagaaccggtctattctaatctcactgatgta
caaattaacaatgaagaagattattttcatttcatgtctgttgtgtttctttacatttgt
caaacagaattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system