KEGG   Bombyx mandarina (wild silkworm): 114250899
Entry
114250899         CDS       T05882                                 
Name
(RefSeq) regulator of nonsense transcripts 3B
  KO
K14328  regulator of nonsense transcripts 3
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03013  Nucleocytoplasmic transport
bman03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114250899
   03015 mRNA surveillance pathway
    114250899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114250899
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     114250899
   mRNA cycle factors
    P-body specific factors
     114250899
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 114250899
NCBI-ProteinID: XP_028040780
UniProt: A0A6J2KFI5
Position
Unknown
AA seq 499 aa
MTEDQDGKDSQSDSGSKTFINKSKDKKSKIHRPLTKIILRRLPPTMTEETFLEQVSPIPE
HDYFYFAKPDPTLGNNLFSRAYINFVNVEDIFLFRDKFDGYVFLDEKGGEYVGIVEYAPF
QRISKKKKKKDPKCGTLESDPIYQEFIESLNKDPEVESQPKLEYSYPINDVSEKKTQSTP
LLEYLAARKLDKRGRDERRRRDNDKRKMRIERKTKEGPIKEEDNEDTEVRKIKTRESEKE
KKDSKEDQTKLDDGMVFESKSYKERKPNLKIDKKKKSENDRTEKEDEVGDDLDGQKKDKR
EKNKIQESPREQKSKKYSDTRKERIKQNVLITKSEKEYALSKLISLCPKSTALSNDIKPF
TQLPQVKTDDLSKIIDGMDKKTKLEAKEETTRNSKDSDKVETKSNVRRNSLDSNKATSND
ESDSKKTTFEERPKSSEREGSEEKEKCDGERRAERRIRNKDRPSLVIYQPGMGKFSKQRL
AKEKETIPTKVSDSEKKDT
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgactgaggatcaagatggtaaagactcacagtcagattcgggttccaagacattcatc
aacaagagcaaggacaagaaatctaagatacatcgtccgttgacaaaaataattcttcga
cgtttaccgcccacgatgactgaggaaacgtttttggagcaagtatcgcctattccagag
catgactatttttattttgccaaaccggacccgactttgggcaataacctattttctaga
gcgtatatcaatttcgttaacgtggaagatatttttctgttccgagataaatttgacggt
tatgttttcttagatgaaaaaggtggagaatatgtaggcatagttgaatatgcacccttc
caaagaatttcaaagaaaaaaaagaagaaagatcctaaatgtggaacacttgagagtgac
ccaatttatcaagagtttatcgagagtctgaacaaagatcctgaggttgagagccaacct
aaactagaatattcttacccaataaatgatgttagtgaaaaaaaaacacaatcaacacct
ttgctggaatatctagccgcacgtaaactagacaagagaggtagagatgaacgtcgtagg
cgcgataatgacaagagaaaaatgagaattgaacgaaaaacaaaggaaggtcctatcaag
gaagaagataatgaggatacagaagtaagaaaaattaaaaccagagaatctgagaaagag
aagaaagattctaaagaagatcaaacaaaactggacgacgggatggtattcgaatctaaa
tcatacaaagaacgtaaacctaatttgaaaattgataaaaagaagaaatctgaaaacgat
aggactgaaaaagaggacgaagtaggagatgatcttgacgggcagaaaaaggataaacgc
gaaaaaaataagatacaagaatctccacgtgagcaaaagagtaaaaaatacagcgacact
aggaaagagagaatcaaacaaaatgttttaattacaaaatctgagaaagaatatgctctt
tcgaagcttatatctctatgtcccaaaagtactgcactcagtaatgatattaaaccattc
actcaactgcctcaagtgaaaactgatgacttatccaagattattgatggaatggataaa
aaaacaaagcttgaagcaaaagaagaaacgacacgaaactcaaaagattcagacaaagtt
gagactaagagtaatgtacgcagaaatagccttgactcaaataaagccacaagcaatgat
gaatctgattcaaagaaaacaaccttcgaagaaagaccaaaatcttcggaacgtgaagga
tcggaagagaaagaaaaatgtgacggcgaacgtcgcgctgaacgcagaataagaaataag
gatcggcccagtctcgtgatttaccagcccggcatggggaagtttagtaaacagcgtctc
gcgaaagaaaaggaaacgatcccgacgaaagtgagcgacagtgaaaagaaagacacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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