KEGG   Brucella abortus bv. 1 9-941: BruAb1_0923
Entry
BruAb1_0923       CDS       T00241                                 
Name
(GenBank) ribonuclease, Rne/Rng domain protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
bmb  Brucella abortus bv. 1 9-941
Pathway
bmb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BruAb1_0923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmb03019]
    BruAb1_0923
   03009 Ribosome biogenesis [BR:bmb03009]
    BruAb1_0923
Enzymes [BR:bmb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BruAb1_0923
Messenger RNA biogenesis [BR:bmb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BruAb1_0923
Ribosome biogenesis [BR:bmb03009]
 Prokaryotic type
  rRNA processing factors
   BruAb1_0923
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 Ogr_Delta zf-ribbon_3
Other DBs
NCBI-ProteinID: AAX74287
UniProt: Q57DJ7
Position
I:complement(905065..907833)
AA seq 922 aa
MSNKMLIDASHPEETRVIVTRGNKIEEFDFESEHKKQLKGNIYLARVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRLALLEAEAKAARAEDDEDEPRAKSDRSERNDRAR
RNRRRGGRRDGQNGEAQANGADKDLPAAEPVGPGFADYVAGTPAAALTQKGDIISEALDN
GDDDDVENEEDMVESVGSEDALEELPTHTRTHRRQYNIQEVIKRRQILLVQVVKEERGNK
GAALTTYLSLAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIVKELEVPQGMGVILRTA
GANRTKAEVKRDYEYLMRLWENVRTLTLQSTAPALVYEEGSLIKRSIRDIYNKDITEILV
SGENGYREAKDFMRMLMPSHAKVVQPYRDHIPIFTRNGVEAQLDRMLVPQVTLKSGGYLI
INQTEALVAIDVNSGRSTREHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVVDFIDMEE
KRNNRAVEKKMKECLKDDRARIQVGRISHFGLLEMSRQRIRASVLESTMQVCPHCGGTGH
IRSDSSMALHIIRGIEDYLLRHSGFDIHVRTPAASALYVLNHKRQILADLEGRFGVEISI
DADESVGNQHFVIDKGAPSTRPVTPSAVQPMVYEDDIEDPEIPVEEDETEEEARTDVQAG
EERSEENDRKRRRRRRRRGGRERDGRDLSAQEEAVSEEASEEDNEIDQANEAVSSASMNE
EDRRKKRRRGRRGGRKNRREDDNRARRIPDPEFVGYTPVLPVKAEESIGEVVETVETVEA
PVVEAAPEEKPEKPARKPRARKTAKTEEAAEAVITAEAEEKPEKPARKTRTRKKAVDEAP
ADEAAAPAEEVVPEKPKRRTRKAAAKPVVEAEDVAEVKETVAAETQVETIAEPKSTEPVV
TSSESEDRKPKRSGWWQKKGFF
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgtccaacaaaatgcttatagatgcctcccacccggaggagacccgcgttatcgtcacg
cgcggcaacaagattgaagaattcgatttcgaatcggaacataagaaacagctgaaaggc
aatatctacctcgcacgcgtcacccgtgtcgaaccgtcgcttcaggctgcattcgtggaa
tatggcggcaatcgccatggcttcctggcattttccgaaattcatcccgactattaccag
attccggtcgccgaccgccttgccctgcttgaagcggaagccaaggccgcacgcgctgaa
gacgacgaggacgaaccgcgcgccaaaagcgaccgcagtgaacgcaacgaccgcgcgcgc
cgcaatcgccgccgtggcggccgccgcgatggccagaatggcgaagcgcaggcaaacggt
gctgacaaggacctgccggcggcagagccggtcggtccgggctttgcggattacgttgcg
ggaacgcccgccgctgctctcacgcagaaaggcgatataatttccgaagccctcgacaat
ggcgatgacgatgatgtcgagaacgaagaggacatggtcgaatcggtcggctcggaagat
gctctggaagagcttccgacccacacccgcacccatcgccgccagtataatattcaggaa
gtcatcaagcgccgccagattcttctggtgcaggtggtcaaggaagagcgcggcaacaag
ggcgctgctctcaccacctatctttcgcttgccggacgttattcggtactgatgcccaac
accgcgcgcggtggcggcatttcgcgcaagatcaccaatccgcaggaccgcaagcgcctg
aaagagatcgtgaaggaactcgaagtgccgcagggcatgggtgtgatcctgcgcacggca
ggcgcaaaccgcaccaaggcggaagtcaagcgcgactatgaatatctgatgcgcctgtgg
gaaaacgtgcgcacgctgacgctgcaatcgacagcgcccgcgctcgtctatgaagaaggc
agcctcatcaagcgctctatccgtgatatttacaacaaggacatcacggaaatactcgtt
tccggcgagaacggctatcgcgaggccaaggatttcatgcgtatgctcatgccgagccat
gcgaaggtcgtccagccttaccgcgatcatattccgatcttcacgcgcaacggcgtggaa
gcgcagcttgaccgtatgcttgtgccgcaggtgacgctcaaatcgggcggctacctcatc
atcaaccagacggaagccctggttgccatcgacgtcaattcgggccgctcgacccgcgaa
cattcgattgaggacaccgcgcttcagaccaatctggaagcagccgaagaagttgcgcgc
cagttgcgccttcgcgaccttgcgggcctgatcgtcgttgacttcatcgacatggaagaa
aagcgcaacaatcgcgctgtcgaaaagaagatgaaggaatgcctgaaggatgaccgcgcc
cgcatccaggtgggccgcatctcgcatttcggccttctggaaatgtcgcgccagcgcatc
cgcgcatcggttctggaaagcaccatgcaggtctgcccgcattgcggcggcaccggacat
atccgttcggattcctccatggcgctccatatcatccgtggtatcgaagactatctgctg
cgccattcgggctttgatattcatgtccgcaccccggcagcgtccgcactttatgtgctc
aatcacaagcgccagattctggccgatctggaggggcgctttggcgtcgagatcagcatt
gatgccgacgaaagtgtaggaaaccagcactttgtcattgataagggtgcgccttctacc
cgccccgtcaccccgtcggcagtacagccgatggtctatgaggacgatatcgaagaccct
gaaatcccggtcgaagaagacgagaccgaagaagaagcaaggaccgatgttcaggctggc
gaagagcgcagcgaagaaaacgaccgcaagcgccgtcgtcgtcgccgtcgtcgcggtggc
cgcgaacgtgacggtcgtgatctgtccgcgcaggaagaagccgtttcggaggaagcatcc
gaagaggataatgaaatcgatcaggccaatgaggccgtgtcatccgcttccatgaacgag
gaagatcgccgcaagaagcgtcgtcgcggccgccgtggcggacggaagaaccggcgtgaa
gacgacaaccgtgcgcgcagaattcctgatccggaattcgtcggttacacacctgttctg
ccggtaaaggccgaagaaagcatcggcgaagtagtggaaacggttgaaaccgtggaagca
cctgtcgttgaggccgcgccggaagaaaagcctgaaaagcccgcccgcaagccgcgtgcc
cgcaaaacagcaaaaaccgaggaagcagcggaagcagtgatcactgcggaggctgaggaa
aagcctgaaaagcccgcccgcaaaacgcgcacgcgcaagaaggctgtcgacgaagcgcct
gcagatgaagccgcagcgcccgccgaggaagtggtacctgaaaagccgaagcgccgtaca
cgcaaagctgccgccaagccggttgtggaagccgaagacgttgccgaggtgaaggaaacg
gttgcggcagaaacgcaggtggaaaccatcgcggaaccgaaaagcacagagccggtcgta
acctccagcgagagcgaagaccggaagccgaagcgttcgggctggtggcagaagaagggc
tttttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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