KEGG   Priestia megaterium DSM 319: BMD_4955
Entry
BMD_4955          CDS       T01219                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bmd  Priestia megaterium DSM 319
Pathway
bmd00300  Lysine biosynthesis
bmd00470  D-Amino acid metabolism
bmd01100  Metabolic pathways
bmd01110  Biosynthesis of secondary metabolites
bmd01120  Microbial metabolism in diverse environments
bmd01230  Biosynthesis of amino acids
Module
bmd_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bmd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BMD_4955 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BMD_4955 (dapF)
Enzymes [BR:bmd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BMD_4955 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase
Other DBs
NCBI-ProteinID: ADF41755
UniProt: D5DM00
Position
complement(4774389..4775243)
AA seq 284 aa
MKKFQFTKMHALGNNYIYVNMFEEHIEEQELAPLAVKVSNVYTGIGSDGMILICPSERAD
VKMRVFNNDGSEAKNCGNGLRCVAKYAYEHNLVTSERFFIETLSGVVEATVHPQGNEVPE
VTIDMGAPILAREQIPMTGASQDQVVNEEMEFGKERLKGTAVSMGNPHVVFYVNNIEQAP
LTTLGPVVEKDSRFPEGVNVEFVEVVNERELNFRVWERGSGITQACGTGACAAVVSSVLN
EKTKKDVPTVVHLAGGDLTIVWQNKGNVLMTGPANVICDGAYYY
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaaaaaatttcagtttacaaaaatgcatgcacttggcaacaactatatctacgtaaat
atgtttgaagaacatatagaagagcaagagttagcaccgcttgctgtaaaagtctcaaat
gtttatacgggaattggatcggatggaatgattcttatttgtccatctgaacgtgcagat
gtgaaaatgcgcgtatttaataatgacggctcggaagcaaaaaactgcggaaacggttta
agatgtgtagctaaatatgcatatgaacataatttagtaacaagcgaaagattttttatc
gaaacgctttctggagttgtagaagcaacggtgcatccgcagggaaatgaagttccagaa
gtgacaatcgatatgggagcacctattttagctagagaacaaattccaatgacgggagca
agccaagaccaagtcgttaatgaagagatggaatttggaaaagaacggttaaaagggacg
gctgtatcaatgggaaatcctcacgttgtcttttacgtaaataatattgaacaagcgcct
cttactacattagggcctgtggttgaaaaagattcgcgttttccagaaggagtgaacgtt
gaatttgtcgaggtagtgaacgaaagagagctgaattttcgtgtatgggaaagaggttcg
ggtatcactcaagcatgtggaacaggagcatgtgctgctgttgtttcgtctgtattaaat
gagaagacgaaaaaagatgttcctactgtcgtacacctcgctggaggagatttaacgatt
gtttggcaaaataaaggcaatgtattaatgacaggtccagccaatgtgatttgtgacggc
gcgtattattattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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