KEGG   Burkholderia metallica: WJ16_14220
Entry
WJ16_14220        CDS       T04871                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bmec  Burkholderia metallica
Pathway
bmec02020  Two-component system
bmec02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bmec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJ16_14220
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    WJ16_14220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmec03021]
    WJ16_14220
Transcription machinery [BR:bmec03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJ16_14220
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_Crp_2 HTH_23
Other DBs
NCBI-ProteinID: AOJ32589
Position
1:3153903..3155408
AA seq 501 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLENDDEWIASPLRV
AADGSLIAQTPPASNTEPAATNGSSSSSDRNERDEPAGADEYDGYASGDGNDGPQWNLDE
FGRSSGASDDDDLPPLQVQEAATSLRDHLSAQLRVTQASPRDRALVMFLIESLDDDGYLT
ATLDEVLADLPPELEIDCDELNAALALLHSFDPAGVGARSASECLKLQLVRLDPSPTRTL
ALEIVSQHLELLAARDFTRLRKHLKASDDALRDAHALIRSLEPFPGAAYGRAEADYVVPD
IIVKKAGQGWLAELNPDVVPRLRINSLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQQ
RFDTILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPFG
TLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVAR
RTVAKYREALKIPAVNLRKSL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaaagccagccttcaactccgcctgtcgcaacatctggcgctgacgccccagctacag
cagtcgatccggctcctgcagttgtcgacgctcgaattgcagcaggaagtcgcgatggcc
gtcgcgcagaacccgctgctcgagaacgacgacgaatggatcgcgagcccgttgcgggtc
gcggcagacggatcgctgatcgcgcagacaccgcccgcatcgaacaccgagcccgccgcg
acgaacggcagcagttcgtcgagcgatcgcaacgagcgcgacgagccggccggcgcggat
gaatacgacggttacgcgtccggcgacggcaacgacggcccgcagtggaacctcgatgaa
ttcggccgctcgagcggcgcgtccgacgacgacgacctcccgccgctgcaggtacaggaa
gcggcgacgtcgctgcgcgaccatctgtccgcgcagttgcgcgtcacgcaggccagcccg
cgcgatcgcgcgctcgtgatgttcctgatcgagtcgctcgacgacgacggctacctgacc
gcgacgctcgacgaagtgctcgccgacctgccgcccgagctggaaatcgactgcgacgaa
ctgaacgcggcgctcgcgctgctgcacagcttcgacccggccggcgtcggcgcccgctcg
gcctccgaatgcctgaagctgcagctggtgcgcctcgatccgtccccgacacgcacgctc
gcgctcgagatcgtgtcgcagcatctcgaactgctcgccgcccgcgatttcacgcggctg
cgcaagcacctgaaggcgagcgacgacgcgctgcgcgacgcgcacgcgctgatccgctcg
ctggagccgttccccggcgccgcctacggcagggccgaggccgactacgtcgtgcccgac
atcatcgtgaagaaggccggccagggatggctcgcggagctcaatccggacgtcgtgccg
cgcctgcggatcaacagcctctacgcgaacatcctgcgcaacagccgcggcgatccgtcg
gccggttcgctcaagcaacagctgcaggaagcacgctggctgatcaagaacatccagcag
cgattcgacacgatcctgcgtgtcgcgcaggccattgtcgagcgtcagaagaacttcttt
gcgcacggtgaaattgccatgcgccccttggttttgcgggaaatagctgatacgctgggc
ctacacgagtcgactgtcagccgtgtgacaaccgggaagtacatgctgaccccgttcggg
acgcttgaatttaagtacttcttcggatctcacgtttcgaccgacaccggtggcgccgct
tcgtcgaccgccatccgagccctcatcaagcaactgataggagctgaagacccaaaatcg
ccactttcggacagccgcattgccgagctgctggcagaacagggtttcgtggtcgcacgc
cgcacggttgcgaaatatcgcgaagccctcaagatcccggcagtgaatctgcgcaagtct
ctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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