KEGG   Brevundimonas mediterranea: GYM46_02235
Entry
GYM46_02235       CDS       T06564                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bmed  Brevundimonas mediterranea
Pathway
bmed00010  Glycolysis / Gluconeogenesis
bmed00020  Citrate cycle (TCA cycle)
bmed00260  Glycine, serine and threonine metabolism
bmed00280  Valine, leucine and isoleucine degradation
bmed00310  Lysine degradation
bmed00380  Tryptophan metabolism
bmed00620  Pyruvate metabolism
bmed00630  Glyoxylate and dicarboxylate metabolism
bmed00640  Propanoate metabolism
bmed00785  Lipoic acid metabolism
bmed01100  Metabolic pathways
bmed01110  Biosynthesis of secondary metabolites
bmed01120  Microbial metabolism in diverse environments
bmed01200  Carbon metabolism
bmed01210  2-Oxocarboxylic acid metabolism
bmed01240  Biosynthesis of cofactors
Module
bmed_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bmed_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bmed_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bmed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bmed_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bmed00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GYM46_02235 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GYM46_02235 (lpdA)
   00620 Pyruvate metabolism
    GYM46_02235 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GYM46_02235 (lpdA)
   00640 Propanoate metabolism
    GYM46_02235 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GYM46_02235 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GYM46_02235 (lpdA)
   00310 Lysine degradation
    GYM46_02235 (lpdA)
   00380 Tryptophan metabolism
    GYM46_02235 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GYM46_02235 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bmed04147]
    GYM46_02235 (lpdA)
Enzymes [BR:bmed01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GYM46_02235 (lpdA)
Exosome [BR:bmed04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GYM46_02235 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C GIDA HI0933_like XdhC_C FAD_binding_2 DAO UDPG_MGDP_dh_N Thi4 Lys_Orn_oxgnase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: QIH71893
UniProt: A0A6G7EE95
Position
450452..451864
AA seq 470 aa
MSRSTTSYDLVIIGGGPGGYPCAIRASQLGLSVAVIDDRELLGGTCLNIGCIPSKALLQA
TERLEMARNLEAFGVMVDNVRADLDGVMRHKGKVVTELGEGVAYLLRKHKVARFQGRGRL
LARDRVEVRAADGAFEVQASKAVVIASGSEAATLPDLPIDERRIVTSAGALSLTAAPRHL
AVIGGGYVGLELGSVWRRLGSEVTVIEVLDRIASGVDSEMSAALHKVLEAQGFQFCLGHK
VVGSRMEGDDVVLDVEPMGDGARGTIKADVVLVSIGRRPATARLDLETVGIAPDRRGFIP
VDEGFRTSADGVYAIGDVIGGAMLAHKAEEEGIALAERLAGGAGHVDYGTIPAVVYTWPE
LASVGRTEDDLKAAGVAYRVGRFPFSANAMAKARLEKNGLVKVLADAATDKILGVHILGP
EAGGLIHEAVAAMQFGAAAEDLARTSHAHPTLPEALREACLAVAERTIHL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagccgttcgacgacctcctacgacctggtgatcatcggcggcgggccgggcggatac
ccgtgtgcgatccgggcgagccagctcggcctgtcggtggcggtcatcgacgaccgcgaa
ctgctcggggggacctgcctgaacatcgggtgcattccgtccaaggcgctgctccaggcc
accgagcggctggagatggcgcgcaatctcgaagcgttcggcgtcatggtagacaatgtg
cgggccgatcttgacggtgtcatgcggcacaagggcaaggtggtgaccgagcttggcgaa
ggggtcgcctacctcctgcgcaagcacaaggtcgcccgcttccagggccgcgggcggctg
ctggcgcgcgaccgggtggaggtgcgcgccgcggacggcgctttcgaggtgcaggccagc
aaggcggtggtcatcgccagcggatcggaagcggcgaccttgcccgacctgcccatcgac
gagcggcgaatcgtcacctccgccggcgccctgagcctgacggcggcgccgcgccatctg
gcggtgatcggcggcggctacgtcggactggagctggggtcggtctggcgtcggctcggc
agcgaggtcacggtcatcgaggtgctcgaccggatcgcctccggcgtcgactcggagatg
tcggcggcgctgcacaaggtgctcgaggcccagggcttccagttctgccttgggcataag
gtggtcggatcgcggatggagggcgacgacgtcgtcctcgacgtcgagcccatgggcgat
ggcgcgcgaggaaccatcaaggccgatgtcgtgctggtctccatcggccgacggcccgca
accgccaggctcgatctggaaacggtcggcattgcgcccgaccgcaggggctttattccg
gtggacgaagggttccggaccagcgccgacggggtctacgccatcggcgacgtcatcggc
ggcgccatgctggcccacaaggcggaggaggaagggatcgccctggccgaacgcctggcg
gggggcgcgggccatgtggactacggaacgattccggcggtcgtctatacctggccggaa
ctggcttcggtcggccgcaccgaggacgacctcaaggcggccggcgtggcctaccgcgtg
gggcgcttccccttctccgccaacgccatggccaaggcgcgtctggagaagaacggtctg
gtcaaggttctggccgacgccgcgacggacaagatcctcggcgtgcacatcctgggccct
gaggccggcgggttgatccatgaagcggtcgccgccatgcagttcggcgcggcggccgag
gatctggcgcggacaagccacgcccatccgaccctgccggaagccctgcgcgaagcctgc
ctggcggtagccgagcgcacgatccacctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (85)   

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