KEGG   Brevundimonas mediterranea: GYM46_12150
Entry
GYM46_12150       CDS       T06564                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
bmed  Brevundimonas mediterranea
Pathway
bmed00300  Lysine biosynthesis
bmed00550  Peptidoglycan biosynthesis
bmed01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bmed00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GYM46_12150
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GYM46_12150
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmed01011]
    GYM46_12150
Enzymes [BR:bmed01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     GYM46_12150
Peptidoglycan biosynthesis and degradation proteins [BR:bmed01011]
 Precursor biosynthesis
  Amino acid ligase
   GYM46_12150
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase RraA-like
Other DBs
NCBI-ProteinID: QIH73633
UniProt: A0A6G7EJ99
Position
2485358..2486815
AA seq 485 aa
MSALHLSDLLRRDVASDPIITGVTSDSRKVAPGALFVALPGTAADGRAFIPQALAQGAAA
VLAPTDTPDSAAPVLVTSGDVRRAYAIAARGFYGAQPRTCVAVTGTNGKTSVAAFCRQIW
AGLGHKSASMGTLGVVGQKGDRTYALTGPGLTSPDAAEAARLMAELAAKDVTHVAVEASS
HGIDQRRLDGVALKAAAFTNLTQDHLDYHGTMDDYRAAKMRLFEALLPRGRTAVLNADSD
AYSAFAAASIMAGLGVMGVGERGRDLALIGRQATPEGQRLTLDVRGDVRDILLPLAGAFQ
ASNALVAAGLCIAAGDRPDEVISALEGLTGAQGRLQRIAAETGRGEVYVDYAHTPDGLET
VLTALRPHATGRLIVVFGAGGDRDRGKRPLMGEIAGRLADVAIVTDDNPRSEDPASIRAQ
VRAGCPEALEIGDRRAAIEAAIEMMRDGDVVVIAGKGHEQGQIVGGTTHPFDDATVASEA
LSLNA
NT seq 1458 nt   +upstreamnt  +downstreamnt
gtgagcgccctgcacctgtccgatctgctgcgccgcgacgtggccagcgatccgatcatc
accggcgtgacctccgacagccgcaaggtcgcgcccggcgccctgttcgtcgccctcccg
ggcacggcggcggacggccgcgccttcattccccaggccctggcccagggggcggccgcc
gtgctggcgccgaccgacacgccggacagcgccgcgccggtgctggtgacctcgggcgac
gtgcgccgggcctacgccatcgccgcgcgcggcttctacggcgcccagcccaggacctgc
gtggcggtgacgggcaccaacggcaagacctcggtcgccgccttctgccgccagatctgg
gccggcctgggccacaagtcggccagcatgggcaccctgggcgtcgtcggccagaagggc
gacaggacctacgccctgaccggccccggcctgaccagccccgacgccgccgaggccgcg
cgcctgatggccgagctggccgccaaggacgtgacccatgtggcggtcgaggcctcgtcc
cacggcatcgaccagcggcgtctggacggggtggcgctgaaggcggccgccttcaccaac
ctgacccaggaccacctcgattatcacggcacgatggacgactatcgcgccgccaagatg
cgtctgttcgaggccctgctgccgcgcgggcggacggcggtgctgaacgccgattccgac
gcctattccgccttcgccgccgcctcgatcatggccgggctgggcgtgatgggggtgggc
gagcgcgggcgcgacctggccctgatcggccgccaggcgacgccggagggccagcgcctg
accctggacgtgcgcggcgatgtccgcgacatcctgctgccgctggccggcgccttccag
gcctcgaacgccctggtggcggcgggtctgtgcatcgcggccggcgaccgtcctgacgag
gtgatcagcgccctggaaggcctgaccggcgcgcaaggccgcctgcaacggatcgccgcc
gagacgggacgcggcgaggtctatgtcgactacgcccatacgcctgacgggctggagacg
gtgctgaccgcgctgcggccccatgcgacgggccggctgatcgtggtcttcggcgccggc
ggcgaccgggatcgcggcaaacggcccctgatgggcgagatcgccggccgtctggccgac
gtggccatcgtcaccgacgacaatccccgcagcgaagaccccgcctcgatccgcgcccag
gtccgcgccggctgccccgaggcgctggagatcggcgaccgtcgcgcggccatcgaggcg
gcgatcgaaatgatgcgcgacggggatgtggtggtcatcgccggaaaagggcatgaacag
ggccagatcgtcggcgggacgactcatccgttcgacgacgccaccgtcgcgtccgaggcc
ctgtcgctgaatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system