KEGG   Brevundimonas mediterranea: GYM46_13560
Entry
GYM46_13560       CDS       T06564                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bmed  Brevundimonas mediterranea
Pathway
bmed03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bmed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GYM46_13560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmed03021]
    GYM46_13560
   03400 DNA repair and recombination proteins [BR:bmed03400]
    GYM46_13560
Enzymes [BR:bmed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GYM46_13560
Transcription machinery [BR:bmed03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GYM46_13560
DNA repair and recombination proteins [BR:bmed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GYM46_13560
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 HEPN-like_int DUF4249
Other DBs
NCBI-ProteinID: QIH73888
UniProt: A0A6G7EKG3
Position
2758351..2759370
AA seq 339 aa
MIERNWQELIRPEKPQIEIGSDAQRKARLVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AIQIDGVVHEFSSLEGVREDVVDIVLNIKQLALRMHAEGPKRMTLRATGPGAVTAGQIDV
SADIEVLNPDHVICTLDDGASVRMELTVQNGKGYVAAELNRPEDAPIGLIAVDALYSPVK
RVAYRVEPTRQGQSLDYDKLLLEVETNGAVTPVDAVAYAARILQDQLQIFITFEEPKKAV
EQSDGKPDLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRK
SLNEIKEVLATMGLSLGMDVPNWPPENIEDLAKKFDDQI
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgatcgaaagaaactggcaagagctgatccgtcccgagaagccgcagatcgagatcggt
tccgacgcccagcgcaaggcgcgcctggtggccgaacctctcgaacgtggcttcggcgtg
acgctcggcaacgcgctccgtcgcgttctgctgtcctcgctgcaaggcgcggccgtcacc
gccatccagatcgacggcgtcgttcatgaattctcgtcgctggaaggcgttcgggaagac
gtggtcgacatcgtcctgaacatcaagcaactggcgctgcgcatgcacgccgaaggcccc
aagcgcatgaccctgcgcgccacgggtcccggcgccgtgacggccggccagatcgacgtg
tcggcggacatcgaggtcctgaaccccgatcacgtcatctgcaccctggacgacggcgcg
tcggtccgcatggaactgaccgtccagaacggcaagggctacgtcgccgccgagctgaac
cgtccggaagatgcgccgatcggcctgatcgccgtcgacgccctgtattcgccggtcaag
cgcgtcgcctatcgcgtcgagccgacccgtcagggccagtcgctggattacgacaagctg
ctgctggaagtcgaaaccaatggcgcggtcacgccggttgacgccgtggcctacgccgcg
cgcatcctgcaagaccaactgcagatcttcatcaccttcgaagagcccaagaaggctgtc
gagcagtcggacggcaagcccgacctgcccttcaacccggccctgctgaagaaggtggac
gagctggagctgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctacatc
ggcgacctgatccagaagaccgagggcgaaatgcttcgcaccccgaacttcggccgtaag
tcgctgaacgagatcaaggaagttctcgcgacgatgggcctcagcctcggcatggacgtg
ccgaactggccgcccgaaaacatcgaagatctggccaagaagttcgacgaccagatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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