KEGG   Bombyx mori (domestic silkworm): 101740659
Entry
101740659         CDS       T02817                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03020  RNA polymerase
bmor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101740659
  09124 Replication and repair
   03420 Nucleotide excision repair
    101740659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmor03021]
    101740659
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101740659
Transcription machinery [BR:bmor03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101740659
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101740659
SSDB
Motif
Pfam: RNA_pol_Rpb4 GSCFA Tfb4
Other DBs
NCBI-GeneID: 101740659
NCBI-ProteinID: XP_004932158
UniProt: A0A8R2LWR5
Position
8:9596062..9597682
AA seq 138 aa
MTGPLQYVVEEDAADLQFPKEFENAETLMISEVDMLLENRKAQNESAEEEQEFSEVFMKT
LTYTNMFKKFKNKETIAAVRHLLQSKKLHKFELASLANLCPETPEEAKALIPSLEGKFED
EELRILLDDIQTKRSLQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgactggacctctacaatatgtggtggaagaggatgcagctgatctgcaattcccaaaa
gaatttgagaatgctgaaactttaatgatatctgaagttgacatgttattggaaaataga
aaagctcaaaatgaatctgctgaagaggaacaagaattctctgaagtcttcatgaaaaca
ctaacgtataccaatatgtttaaaaagttcaaaaacaaagagacaatagctgctgttaga
cacctattacaatcaaaaaaacttcacaagtttgaattggcaagcttagcaaatttatgt
cctgaaacaccggaggaagcgaaagcactgataccatcattagaaggaaaatttgaagat
gaagaactaagaatacttttggatgacatacaaactaagagaagtttacaatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (15)   
   RefSeq(nuc) (7)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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