KEGG   Bombyx mori (domestic silkworm): 101741767
Entry
101741767         CDS       T02817                                 
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
bmor  Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101741767
Enzymes [BR:bmor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     101741767
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    101741767
SSDB
Motif
Pfam: POLQ_helical DEAD Helicase_C HTH_61 ResIII HHH_5 DUF4332 Cdd1
Other DBs
NCBI-GeneID: 101741767
NCBI-ProteinID: XP_012546014
Position
13:complement(936719..954077)
AA seq 1054 aa
MNSKDKRNIEHTSTPKRRRLSLRRKCSNLKTYIYNAPHEDSIPEIADEETNTIHRCESPR
LPCNQVEYLSESGNSSDIPCSPGVSNNYTLNNISNWESLVSSANNKSSSHIIKQEIENIS
DEMFCSLIEKSVSNQEEVVMKNDDNNVNSQANHNQIFKLNCGSKDELETRNELMPISPII
NSKSFTFNKGTNQNENINASTINYEVDIENYFDEINHTISNFDTVKLNKSSLFETKDSFL
LDIKDDSILGQEFKSDIHDLVERKLETKLNDKQAVMSNLKSSNSFYGLPISAKELFKTFR
NIERFYDWQEECLNLDAIKHRRNLIYALPTSGGKTLVSEVLMMREVINRKKNALFILPYV
AIVQEKIWALSPFAVQLDFLIEEYAGGKGSLPPKKRRKKNTIYIATIEKGLALVRSLIEL
RRLDELGLIVVDELHLIGEKGRGGTLETLLTTVIFVNQNIQIVGMSATIGNLSEVATFLK
AEVYERHFRPVELTEYVKLGSTLHRMLWTDEGLELVPDRELDFNYSAEQRARDPDGVCGL
LRGGRAALVFCPTQRSCENVAATVAAMLPPEMADGRAEERLALVEALRAEGSTDALLQAA
SCGVAYHHAGLATDERHLLEQAFRSGVLSTICCTSTLAAGVNLPAARVLLRGAAGARGGP
PALSAAAYRQMAGRAGRAGLAAAGESILICSPQQWEHLKPVLEAGVAPVTSVLRPSLESL
ILSAVTLQLADTGPELKRLLDSTFMAVPKAAESAAADTRAACQEVLRSLTRAGVLDVKGQ
RKLNQDNDDEELYNSQFVVSRLGQAAVKGCLSVEAARRLVAELRRAARGLVLCGPLHLLY
LAAPHDDPVRPDPRHFYSLYCELDEEGLQTAKALGINETNAIRMMTGRPMASVPSLVVSR
FYMALMLRDLWRHMPLHAVADKYLVGRGRVQWLLTAGCAGAGGAAAACEALGAAPFAALL
QPLALALRTCAHPQLHLLMELPAVKKARALQLMRAGYKRIEDVAKASPENLTSSISHLSR
TAATHLISAARMMLIEKVENLRAEAEDVMQELNL
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgaattcaaaagataaaagaaacatagaacatacttcaacacctaaacgtcgtcgtctt
tcactcagacgaaaatgttcaaatttaaaaacatacatttacaatgcacctcatgaagat
tctatacctgaaatagctgatgaagaaactaatacgatacaccgatgtgagtcaccgcgt
ctaccgtgtaaccaagttgaatatttgagtgaatctgggaacagtagcgatattccatgt
tccccgggagtttcgaataactataccttaaacaacatcagtaactgggaatcactagta
tccagtgcaaataacaagagttctagtcatataattaagcaagaaattgaaaacatatct
gatgagatgttctgttcgctgatcgaaaaatctgtttctaatcaagaagaagttgttatg
aaaaatgatgataataatgttaatagtcaagccaatcacaatcaaatcttcaagcttaac
tgtggttccaaagatgaattagaaactagaaatgaacttatgccaatttctccaataata
aatagtaaatcatttacttttaataaaggaactaatcaaaatgaaaatatcaatgccagc
actattaattatgaagttgatattgaaaattattttgatgagatcaaccataccataagt
aacttcgatacagtaaaattgaataaatcatccctttttgaaacaaaagattcattttta
cttgacattaaagatgacagtattctaggtcaagaattcaaatcggatattcatgatcta
gttgaaagaaaattagaaacaaaattgaatgacaagcaagcagtaatgagtaatttgaaa
agttcaaatagtttttatggactcccgatctctgctaaagagctatttaaaacttttagg
aatatagagaggttttatgattggcaagaggaatgtctgaatctagatgcaataaaacat
agaagaaatttgatatatgctctaccaactagtggtgggaagaccttggtgtctgaggtt
ttaatgatgagagaagtcatcaacaggaagaagaatgctttgttcatattaccctatgtt
gctattgttcaggaaaaaatctgggctctgtcaccatttgcagtgcagctagatttccta
atagaagaatatgctggtggaaaaggcagtctaccgccaaagaaacgacgcaaaaagaac
actatttacattgcgaccatcgagaagggtttggcacttgttagaagtctcatagagctg
cgaagactggacgaacttggacttattgtggtagacgaacttcatcttattggagagaaa
ggacgcggcggtactctagagacgttgttgaccactgtcatattcgttaaccagaatata
caaatagtcggcatgagcgcgacgatagggaacttaagcgaagtggcaacgttcctgaag
gcggaagtgtacgaacgtcacttccggccggtggagctgactgagtacgtgaagctcggg
agcacgctgcacaggatgctgtggacagacgagggcttggagcttgtacctgatagagag
ttggattttaattactcggcggagcagcgcgcgcgcgacccggacggcgtgtgcgggctg
ctgcgcggggggcgggccgcgctcgtgttctgtcccacgcagaggagctgcgagaacgtc
gccgccactgtagccgccatgttgccgccagagatggcagacggtcgcgccgaggaacgc
ttagctctggttgaagctctgagggccgagggctccaccgacgccctgctgcaggcggcg
tcctgcggcgtggcctaccaccacgcggggcttgcgaccgacgagcgacacttgttggaa
caggccttcaggtcgggggtgctgtccaccatatgctgcacgtcgaccctggcggccggc
gtgaacctgccggcggcgcgcgtgctgctgcggggcgcggcgggcgcgcggggggggccg
cccgcgctctccgccgccgcctaccgacagatggcgggccgggcgggcagggcggggctc
gccgccgccggcgaaagcatactaatatgcagcccccagcagtgggagcatttgaagcca
gtactggaagcgggagtggccccggtgaccagcgtcctgcgaccctcgctagagagctta
atactgagcgccgtgactctacagttagcggacactggccccgagctgaagagactgctg
gactccacgttcatggctgtcccgaaagctgctgaaagcgcggccgccgacacgagggcg
gcgtgccaggaggtgctgcggtccctcacgcgtgccggagtcctggacgttaagggccaa
aggaaactaaaccaggacaatgatgatgaggagctatacaactctcagttcgtcgtcagc
agactcggtcaagccgctgtcaaaggatgcctgtcggtggaggcggcgcggcggctggtg
gcggagctgcgtcgtgcggcgcgcgggctggtgctgtgcgggccgctgcacctgctgtac
ctggcggcgccgcacgacgaccccgtgcggcccgacccgagacacttttactcgctgtac
tgcgaactagacgaagagggcctgcagacagctaaggcgctgggcatcaacgagacgaac
gcgatccgcatgatgaccgggagacccatggcttccgtgccgtcgctggtcgtgagccgg
ttctacatggcgctgatgctgcgcgatctctggcgacacatgccgctgcacgccgtggcc
gacaaatacctggtggggcggggccgcgtgcagtggctgctgacggcggggtgcgcgggg
gcggggggcgcggcggcggcgtgcgaggcgctgggggcggcgcccttcgccgcgctgctg
cagccgctggcgctggcgctcaggacgtgcgctcatccgcaactacacctgctcatggaa
ctgccagccgtgaaaaaagcccgtgcgctgcagctgatgcgtgcgggatacaagagaata
gaagacgtcgctaaagcttctccagaaaatttgacctcctccatcagtcatctgtccagg
accgccgccacgcacctcatcagtgctgccaggatgatgctcatagaaaaagttgagaat
cttcgtgccgaagcggaagacgtgatgcaggaactgaatttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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