KEGG   Brassica napus (rape): 106348281
Entry
106348281         CDS       T04128                                 
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
  KO
K03093  RNA polymerase sigma-I factor
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106348281
Transcription machinery [BR:bna03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     106348281
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 GerE Sigma70_r4_2
Other DBs
NCBI-GeneID: 106348281
NCBI-ProteinID: XP_013643447
Position
A6:complement(21434543..21437469)
AA seq 510 aa
MGVVFISSSAARSPLGLSTDLRTQRSSLKKPSIVAFKADDSTPTNSSLIIDKQKEKRAVA
TRRKPCKDTKTTKSLDQNVAPSCPLDYNEAAARLESIYKLSPPPGTSLEEEDGIDGSSKV
RVPRRRKRKESGEEKKVVVRNNVKKEKRLTLDKRIALKRNVQEKPVNASSSAREKVTKKQ
QEEEKIERLVRDYSASNDIVSLDWKKMKIPPVVSSAEHTWLFKLMQPMKALLQVKDELQK
SMGREPREAEIAGEINMSVAEVKRKIEIGRAARNKLIKTNLRLVLFVMNKYFQDLTNGPK
FQDLCQAGMRGLITAIDRFEPKRKLRLSTYGLFWIRHAVIRSMTTSNFTRVPFGLESVRV
EIYKTKMELLFEFGRLPTEEEVVKRLKISPERYREVLRAAKPVYSLNSKHAVTQEEFIKG
ITDVDGVGADNRRQLALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
SREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgggagtcgtgtttatttcaagttcagctgcaagatcacctctcgggctaagcactgat
cttcggacacaacggtcttcactgaaaaagccatccatcgtcgctttcaaagcagatgat
tccactcccaccaactcatctctgatcattgacaagcaaaaggagaagagagcagtagca
acgagaagaaagccctgtaaagacacgaaaacaacaaaatctctagatcaaaacgtggct
ccttcctgtcccttagattacaacgaagccgctgcaagactagaaagcatttacaagctt
agccctcctcctggaacttccctcgaggaagaagacggtatcgatggcagctccaaagtg
agagttccacggaggaggaagaggaaagagagtggagaagagaagaaagtagttgtgagg
aacaatgtgaagaaggagaagcgactgactcttgataaacggatcgcgttgaagagaaac
gttcaagagaaaccggtcaacgcttcttcttctgctagggagaaagtaacgaagaagcag
caagaggaggagaagatcgagaggctagtgagagactactcagcttctaatgatatagtc
agcttggactggaagaaaatgaagatacctcctgttgtttcttccgctgaacatacttgg
ttgtttaagttgatgcaacctatgaaggcactccttcaagtgaaagatgaattgcaaaaa
agcatgggaagagagccaagggaagctgaaatagctggagagatcaatatgagcgtggct
gaagtgaaaaggaaaatcgaaatcggtagggctgcaaggaacaaacttattaagaccaat
cttcgccttgtattgtttgttatgaacaaatattttcaagatttaaccaacggaccgaag
ttccaagacctgtgtcaagccggtatgagagggctcatcacagctattgaccggtttgag
cctaaaaggaagttacgtctctcaacttatggtttgttttggatcagacatgccgtcata
cggtctatgacaacctctaacttcactcgtgtcccttttggacttgaatcggttagagtg
gagatctacaaaacaaagatggagctcttgtttgagtttggaagactccctacagaggaa
gaggtagttaagagactcaagatctcacctgagagataccgtgaagtcttgagagccgcg
aaaccggtttactcgctaaactcaaaacatgcggttactcaagaagagttcatcaaaggg
atcacggatgttgatggtgtaggagctgataaccggagacaacttgctctgctcaggcta
gctctcgacgacgtgctggattcactgaagcctaaagagagtcttgttattagacaaaga
tacggtctggacgggaaaggagacaggacgctaggagagatagctgggaatctcaacatc
tccagagaaatggtgaggaaacatgaggtcaaggctttgatgaagctcaagcatcaggct
cgagttgattaccttcgtcagtacatcatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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