KEGG   Brassica napus (rape): 106353060
Entry
106353060         CDS       T04128                                 
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
bna  Brassica napus (rape)
Pathway
bna00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    106353060
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bna01007]
    106353060
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106353060
Enzymes [BR:bna01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     106353060
Amino acid related enzymes [BR:bna01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   106353060
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    106353060
 Prokaryotic type
   Other AARSs
    106353060
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 106353060
NCBI-ProteinID: XP_013648189
Position
A3:complement(16873398..16876631)
AA seq 618 aa
MEGSADQTTQAMSKLSMDPAPSSTAEAGDGARSKNALKKELKMKQREEERKRKEEEKAKQ
APKASSQKSVASSADDEDMDPTQYFENRLKYLAAEKAKGENPYPHKFAVSMSIPEYIEKY
GGLNNGDHVEDAEVSLAGRIMSKRASSSKLFFYDLHGENFKVQVMADASKSGLDEAEFSK
LHANAKRGDIVGVTGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADSVGAKKPENWVPG
EPRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRANIISYVRRFLDNQRFLEVETPM
MNMIAGGAAARPFVTHHNDLDMKLYMRIAPELFLKQLIVGGLERVYEIGKQFRNEGIDLT
HNPEFTTCEFYMAFADYNDLMKMTEDMLSDMVKELTGGYKIKYHANGYDKEPIEIDFTPP
FRRIEMIGELEKVANLSIPKDLASEEANKYLIDACARFDVKCPPPQTTARLLDKLVGEFL
EVTCVNPTFIINHPEIMSPLAKWHRSNDVLTERFELFINKHELCNAYTELNDPVVQRQRF
ADQLKDRQSGDDEAMALDETFCSALEYGLAPTGGWGLGIDRLAMLFTDSQNIKEVILFPA
MRPQDDPASVKASLQAEN
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggaaggctcagctgatcaaaccacacaagcaatgtcaaaactatccatggatcctgct
ccctcgtccactgctgaggctggcgacggagctcggagtaaaaatgctctgaagaaggaa
ctgaagatgaagcagcgagaggaagagaggaaacgcaaggaagaggaaaaagccaaacaa
gctccaaaggcaagctcccagaagtcagtggcatcatcagcagatgatgaggatatggat
ccaacgcaatactttgagaacagattgaagtatctcgcggcggagaaggctaagggggag
aatccgtaccctcacaagtttgctgtgtcgatgtctatccctgagtacattgagaagtat
ggtggtttgaacaatggggatcatgttgaagacgctgaggtttctctagctgggaggata
atgagcaagcgagcttcctcttcgaagctattcttttatgatctacacggtgagaatttc
aaggtccaggttatggctgatgcaagtaagtcagggttggatgaagctgagttttcaaag
ctccatgcgaatgctaagcgtggtgatattgttggtgttactgggtttccaggaaaaact
aagagaggagagttgagtatttttcctcgatcgtttattcttctgtcacattgcctccac
atgatgccaagaaaggctgacagtgttggcgcaaagaaacctgaaaactgggttccaggt
gaaccgagaaatcctgaagcatatgttctgaaagatcaggaatctcgatatcgccagcgt
taccttgatctaatgttgaacgtggaggttcgccagatattcaaaaccagagccaatatc
atttcctacgtccggagatttctcgacaaccaaagattcttggaggttgagacacctatg
atgaacatgattgctggtggagcagctgcccgaccctttgtgacacatcacaatgatcta
gacatgaagctgtacatgcgtatcgcacctgagcttttcctcaagcaacttatcgtcggt
ggcttagaacgtgtctatgagattgggaagcagttcagaaacgagggtattgacctgaca
cacaacccggagttcaccacttgcgagttctatatggctttcgcagactacaacgacctg
atgaagatgactgaggatatgttgagtgacatggttaaagagttaacaggtggttacaaa
attaagtatcatgctaatgggtatgataaggagccaatcgaaatcgacttcactcctcca
ttcaggaggattgagatgataggagagttagagaaggtggctaacctcagtattccaaaa
gacttggctagcgaagaagccaacaagtatctgattgatgcttgtgccaggttcgacgtg
aaatgtccgcctcctcagactaccgctcgcctactagataaacttgttggagagtttcta
gaagtgacatgtgtgaacccaacgttcatcatcaaccatcccgagatcatgtctccattg
gctaaatggcatagatcgaacgatgttctgactgagagattcgagctgttcatcaacaaa
catgaactctgcaacgcctacaccgagctgaacgatcctgtggtccagcgtcaaaggttt
gctgatcagctcaaagatagacagtctggagatgacgaggccatggctttagatgagact
ttctgcagtgctttagagtatggattggctcctacaggtggttggggattgggcatagac
aggcttgccatgctgtttaccgactcacaaaacatcaaggaggttattctcttcccggca
atgaggccacaagacgatccagcatccgttaaagcttctttgcaagcagagaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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