KEGG   Brassica napus (rape): 106365894
Entry
106365894         CDS       T04128                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g25630
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106365894
   03029 Mitochondrial biogenesis [BR:bna03029]
    106365894
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    106365894
Mitochondrial biogenesis [BR:bna03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106365894
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long TPR_19 Phage_ABA_S Radical_SAM TPR_15 Ufm1
Other DBs
NCBI-GeneID: 106365894
NCBI-ProteinID: XP_013660861
Position
A9:complement(3547288..3550286)
AA seq 569 aa
MGDFENKAPVMSGAQRSALVKTTVNKGGEHQYHRCKSCNEGSSCRTVRSRTKLMNILIER
GRPHEAQTLFKSLSETGHRPSLITYTTLLAAMTVQKQYGSITSIVSEVEQSGTKPDSIFF
NAVINAYSESGNVEEAVQALLKMKGLGLNPTTSTYNTLIKGYGIAGRPERSSELLKLMLE
EDSVDVRPNVRTFNVLVQAWCKKKKVEEAWRVVEKMEECGVKADTVTYNTIATCYVQKGE
TERAEREVVEKMGRPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMGVEANLVVFNSLIK
GFVEVMDRDGIDEVLTLMKECKVKADVITYSTVMNAWSSAGYMEKAAQVFKQMVKAGVKP
DAHAYSILAKGYIRAKEPQKAEEILETMVESRPNVVIFTTVISGWCGVGSMEDAMRVFNR
MCEFGVSPNIKTFETLMWGYLEAKQPWKAEEVLQMMKGFGVKPENSTYVLLAEAWRVAGL
GDESNKAIEALKCRDIEKLEKLYQKQASAGGFSLLQIPVGKREVPTAKAVNLSACKLGAR
VPPIVCQKQSQAQFGISGQFVQSCTVFLN
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgggagatttcgagaacaaagctcccgttatgtctggagcacaaagatccgcacttgtt
aagactacagttaacaaaggaggagagcaccagtatcatcgctgcaagtcatgtaatgaa
ggaagcagctgcaggacagtgaggtcaagaacgaagctgatgaacattctgatagaacgc
ggacgtccacacgaggcccagacacttttcaaatctttgtcagagacaggacacagaccg
tctttgatcacttacacaactctcttagccgcgatgacggtccaaaagcagtacggctcc
ataacctccatagtctctgaggttgaacagagcgggacaaagcctgactccatcttcttc
aacgcggtcatcaacgcttactccgagtccggtaacgtcgaagaagctgttcaggcgctg
ctgaagatgaaggggcttggtctgaacccgaccacaagcacttacaacactttgatcaaa
gggtacggaatcgcggggcggcccgagagatcctccgagctgctgaagctgatgctggag
gaggacagcgtcgatgtgaggcctaatgtgaggacgttcaatgttctggtgcaagcttgg
tgcaagaagaagaaggtggaggaggcgtggagagtggtggagaagatggaggagtgtgga
gttaaggcggatacggtgacgtataacacgattgcgacttgttatgtgcagaaaggagag
acggagagagctgagagagaggtggttgagaagatggggagaccgaatgggaggacgtgt
gggattgtggtgggagggtactgcagagaagggagggtgagagatggtttgaggtttgtg
aggaggatgaaggagatgggagttgaagctaatcttgtggtgtttaattcgttgatcaaa
ggcttcgttgaggtcatggaccgtgatggcatcgatgaggttcttaccttgatgaaggag
tgtaaggtgaaggcagatgtaatcacatacagcaccgtaatgaacgcttggagctcagca
ggatacatggagaaagccgcacaagtcttcaaacaaatggtcaaagcaggagtcaaacca
gacgcacacgcttacagcattctagccaaaggctacataagagccaaagagccccaaaaa
gccgaggagattctcgagaccatggtcgaatcccgccccaacgtggtgatcttcaccacg
gtgatcagcggatggtgcggcgtcggaagcatggaggacgcgatgagggtattcaacagg
atgtgcgagttcggcgtctcgccgaatataaagaccttcgagacgctgatgtggggttac
ttggaagccaagcagccgtggaaagctgaagaggttttgcagatgatgaaagggtttggc
gtgaagcctgagaactctacctacgtgctgttggctgaagcgtggcgcgtcgcggggctg
ggggatgagtcgaacaaagcgatcgaggcgttgaagtgtagagatattgagaagttggag
aagctttaccagaaacaggcgtcggcaggggggtttagtctgttgcagattcctgtcggg
aaacgggaggttccgaccgcgaaagctgtgaatctttctgcttgtaaactcggagctcga
gtgccaccgattgtatgccagaagcagtcgcaagcgcagtttgggatcagtgggcagttt
gtgcagtcttgtacagtgttcttgaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system