KEGG   Brassica napus (rape): 106378370
Entry
106378370         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106378370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106378370
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106378370
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     106378370
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF3276
Other DBs
NCBI-GeneID: 106378370
NCBI-ProteinID: XP_048603809
Position
C2:complement(43322908..43333067)
AA seq 1149 aa
MVLDHEDLDLMNDDNFVDKKKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVG
IKKIVRANSRITSTLDPSIYLWFKDVYVGEPSILNVGTAEVINPHMCRLADMTYAAPIYV
NIEYVHGIHGKTTISAKDKVVIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVI
KGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSSETTKSKTVIQMEKEKIYLYLHQFV
KKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSMEECISEGVNTRQQALDYLEAKV
KRSSYGPPEKDGRALYILRELFLAHVPVRDDNYRQKCFYVGVMLRRMIEAMLNKDSMDDK
DYVGNKRLELSGQLISLLFEDLFKTMTTEAIKKVDAILQKPNRASRFDFSQCLTGEKNHN
ISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGSITKISPQFEKSRKVSGPRS
LQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDQEEGPLVAMCFKLGVTDLEVLSAEE
LHTPDSFLVIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGG
RVCRPLVIAENGESRVKQHHMKELKDGVRTFDDFIREGLIEYLDVNEENNALIALYESEA
MKDVTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLY
LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFERCI
VKKTVVATCQKYGNDTVDRILRPERTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIP
VDTRDNITSPPSDTQYRPAREYFKGPEGETQVVERVALCSHKNGNLCIKYNIRHTRRPEL
GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMMELLGSKAGV
SSGRFHYGSAFGEESGHADTVENISKTLVKHRYSYCGKELLYSGLSGEPLQTYVFMGPIY
YQKLKHMVMDKMHARGSGQRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERL
MLSSDPFEVQVCRACGLLGYYDYKLKKAVCSTCKNGDSIATLKLPYACKLLFQELQSMNV
VPRLVLREM
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggtactcgatcacgaagacttagacttgatgaacgatgacaacttcgtcgacaagaag
aagctttcagctcctatcaagtctacagcagataagtttcaactcgtccctgagtttctc
aaggtgagaggacttgtgaagcaacaccttgattcattcaattacttcatcaatgtcggg
atcaagaagattgttcgtgcgaattctcgtattacgtccactctcgacccttccatttac
ctatggtttaaggatgtctatgttggtgaaccctctattttaaatgttggtacggcggaa
gtaatcaatccacacatgtgccgactagctgacatgacgtatgctgctccgatatatgtc
aacatagaatatgttcatggaattcatggaaagacgacgataagtgcaaaggataaggtt
gttatcggaaggatgcctattatgttgaggagttgccgctgtgtattacacggaaaagat
gaagaggaacttgcaagattgggtgagtgcccacttgatcctggaggatattttgtcatc
aaaggaaccgagaaggtgttgttgatacaagaacaactttctaagaataggattattatt
gattctgataaaaaagggaacataaatgcatctgtcacaagcagcagtgaaacaacgaaa
agcaaaacagttattcagatggagaaggagaagatatatttgtatctacatcaatttgta
aaaaagattccaataataatcgtcctaaaagctatgggaatggagagcgaccaagagatc
gtacagatggttggaagggatccccgttttagtgcatcacttctaccttctatggaggag
tgtattagtgaaggtgtgaatacacgacaacaagcactggactatcttgaagcaaaggtg
aagagatcatcgtatggaccacctgaaaaggatggccgagctctatacattctgagagaa
ttattccttgcacatgtacctgtgcgtgatgacaattatcgccaaaaatgtttctatgtt
ggggtgatgttgagaagaatgattgaagcaatgttgaacaaagattccatggatgacaag
gactatgttggtaacaagcggttggagttgtctggacaactaatatctcttctctttgag
gatttgttcaaaacgatgaccaccgaggccattaaaaaagtagatgctatccttcaaaaa
cctaaccgggcaagccgattcgatttttctcaatgtctcactggagaaaagaatcataat
atttcttttggattagaaagaactctttccacgggaaactttgatattaaaaggttcaga
atgcataggaaaggcatgacacaggtcttgacaaggttatctttcattgggagcttgggg
tctattacgaaaatttcgccacagtttgaaaagtccagaaaagttagtgggcctagatcc
ttgcaacccagccagtggggcatgctctgcccatgtgatacccctgaaggagaatcttgt
gggcttgtcaagaatttggctttaatgactcatgtcacaacggatcaagaggaaggccca
ttggttgctatgtgcttcaaattgggtgttacagatctggaagtattgtcagcagaggag
ctgcatactccagactcgtttttggtcatatttaatgggctaatacttggcaaacataga
aggccacagtacttcgccaattcacttagaaggctgcgtagagctgggaaaattggcgaa
ttcgtcagtgtattcataaacgaaaagcagcattgtgtttacgttgcttctgatggtggg
cgggtgtgtcgtccacttgttatagcagagaatggagaatcaagagttaaacaacaccac
atgaaagaactaaaggatggtgttcgcacttttgatgacttcattcgtgaaggtttgatc
gagtatcttgatgttaatgaggaaaataatgcgctgattgctttatacgaaagtgaagcc
atgaaagacgtaacccacattgagattgagcctttcaccatcttaggggttgttgctggt
cttatcccctaccctcaccataatcagtcgcctagaaatacttaccagtgcgctatggga
aaacaagcgatgggaaatattgcttacaaccagttaaaccggatggactctttgctttac
ctattggtgtatcctcaacgacccctgttgacaacgagaacaattgaattggttggatac
gataaacttggagcaggtcaaaatgcaacagttgctgtgatgagtaatactgggtacgat
attgaggatgcaattgtgatgaacaaagcttccttagatcgtggttttgaacgctgcatt
gttaagaaaacagttgttgctacttgccagaagtatggtaacgatacagtggacagaata
ctaaggccagaaagaacaggtccagatgctgaaaagatgcagatactggatgatgatgga
atcgctgctccaggggaaattattagaccgaatgatgtgtatataaataaacaaatccct
gttgacaccagagataacattacatctccgccatcagacactcaatatcgtccggccaga
gagtattttaaaggtcctgaaggggagacacaagtggtcgaaagagttgctctctgttct
cacaagaacggtaatttatgcataaagtataacatccgacatactcgtcgaccagagctt
ggagacaagttcagcagtaggcatgggcagaaaggtgtttgtggtacaatcgttcagcaa
gaagattttccattttctgaacgtggaatttgccctgatttgatcatgaatcctcatggg
tttccaagtcgtatgacagtaggtaagatgatggaacttcttggaagtaaagctggggtg
tcttctggtagatttcattatggtagtgcttttggagaagaaagtggtcatgctgacacg
gttgaaaatataagtaagacccttgtgaagcatcgctattcctactgtgggaaggagttg
ttatactcaggtctcagtggcgagccattgcaaacatacgtctttatggggccaatatat
taccagaaactgaaacacatggtcatggacaaaatgcatgcgcgagggagtggacagcgt
gtgatgatgacaagacagccaactgaagggaaatctaaaaatggaggtttacgagtggga
gaaatggaacgagattgtcttattgcttatggagccagcatgttgatctatgagcgtctc
atgctctctagtgatccttttgaagttcaggtttgcagagcttgcggtttattgggatat
tacgattacaagctgaagaaggcagtttgttcaacttgtaaaaatggtgatagcattgct
actttgaaactcccttacgcatgcaagctccttttccaggaactgcagtcgatgaatgtt
gttccgcgtcttgttctaagggaaatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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