KEGG   Brassica napus (rape): 106380899
Entry
106380899         CDS       T04128                                 
Name
(RefSeq) alanine--tRNA ligase-like
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
bna  Brassica napus (rape)
Pathway
bna00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    106380899
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bna01007]
    106380899
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106380899
Enzymes [BR:bna01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     106380899
Amino acid related enzymes [BR:bna01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   106380899
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    106380899
 Prokaryotic type
    106380899
SSDB
Motif
Pfam: tRNA-synt_2c DHHA1 tRNA_SAD YscO Striatin T3SSipB
Other DBs
NCBI-GeneID: 106380899
NCBI-ProteinID: XP_013676194
Position
A5:complement(13335212..13341731)
AA seq 955 aa
MPGSEPSEIKWPAKRVRDTYFDFFKGKGHKFWPSSPVVPHNDPSLFFANAGMNQYKPIFL
GTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA
IEWAWELLTKVYGLPVDRIYATYFGGDEKAGLQPDLESRDIWLQFLPPGRVLPFGCKDNF
WEMGDTGPCGPCTEIHYDRVGNRDAASLVNYDDPTCLEIWNLVFIQFNREIGGSLKPLPA
KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKIGLEDVDRVDMAY
RVVADHIRTLSFAIADGSRPGNEGREYVLRHILRRAVRYGKEILKAEEGFFNGLVSSVIR
VMGDVFAELKEHEKKITEIIKEEEASFCKTLAKGIEKFRKAGQSVQGNTLSGEDAFILSA
TYGFPIELTQLMAEEYGLLVDVDGFNKAKKEARDISKNAQNKQAGGTIVMDADATSTLHK
MGVSATNDSFKYIWFQGHDSEVKGIYTGSAFLESSASGDNVGLVLASTSFYPEQGGQIFD
TGIIEGSFGTFNVCNVKIFGGFVLHIGSLSTESGEVSVGDEVTCKVDYERRKLIAPNHTC
THMLNFALKEVLGDHIDQKGSIVLPEKLRFDFSHGMPVDPEDLRKIESIVNTQIKDELEV
YSKESVLSEAKRIKGLRAVFGEVYPDPVRVVAIGRRVEDLLADPENDEWSSLSSEFCGGT
HITNTREAKAFALLSEDGISKGIRRIIAVTTKSAFDALNTASLLEKEVDEASKAVGNALE
KKVNALKRRVDEVDIPAAKRADIKAKIAQLQNEVRTAQKKIAKENLKKSVEIAIEAAESA
TSDGKNFCIVQLDVGLDAAAVREAVSKVMQKKGMSVMVFSTDESTNKAVVCAGVPDKSDQ
FKQLDVTEWLQSALSPIKGKCGKGKSGLASGQGTDASQVSSAVDLAASFASMKLN
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgcctggttccgaaccgtcagagattaagtggccagcgaaaagagtgagggatacttat
ttcgatttcttcaaggggaaaggtcacaagttctggccatcaagccccgttgttccccac
aatgatccttctcttttcttcgctaacgctggaatgaaccagtacaagccaatatttttg
ggaacggctgacccaaatacggagcttagcaagctgacccgggcatgtaacacccagaag
tgtattcgtgctggtggaaagcataatgatcttgacgatgtgggcaaagatacttaccat
cacaccttctttgaaatgctcggtaactggtcctttggtgattatttcaagaaggaagcc
atcgaatgggcttgggagctcttaaccaaggtctatgggctaccggttgatcgaatttat
gctacctattttggcggtgatgagaaagctggtctgcagccggatcttgagtcaagagat
atttggcttcagtttcttccacctggacgtgtacttccttttgggtgcaaagataacttc
tgggaaatgggagacacaggtccttgtggaccttgtactgagatacattatgatcgtgtt
ggtaaccgtgatgcggcatccttagttaactatgacgatccaacatgtttggaaatatgg
aacttggtgtttattcagttcaacagagagattggtggctcacttaaacctctgcctgcg
aagcatgttgacaccggaatgggtttcgagaggttgacttctgttcttcagaacaaaatg
agcaactatgatacagatgtgttcatgcctatctttgatgacatccaaaaggccacggga
gctaggccatattctggaaaaattggtctggaagatgttgacagagttgacatggcttat
agagtggttgctgatcacattaggactctatccttcgctattgctgatggctctcgtcct
ggtaatgagggccgtgagtatgttctgcgacatattcttcgtcgagcagttcgctatgga
aaggagatcctaaaagctgaggaaggatttttcaacggactcgtaagttctgttattcgg
gtgatgggtgatgtctttgcggagttgaaggaacatgaaaaaaagatcacagagataatc
aaagaagaggaagcaagcttctgcaagacactggcaaagggaattgagaagtttcggaag
gctggtcagtcagttcaggggaatacgctaagtggagaggatgcttttatattatcggcg
acatatggattccctatagagttgactcagttaatggctgaagaatacgggttgctagtt
gatgttgatggtttcaacaaagccaagaaagaggcgagggatatatcaaagaatgcccag
aataagcaagctggtggcaccattgtcatggatgctgatgctacatcaacgttgcacaag
atgggtgtttcagcaacaaatgattctttcaaatacatttggttccagggtcacgatagt
gaagtgaagggtatctacactggctctgctttcctggaaagttctgccagtggcgataat
gtgggactagtattagcgtctacaagtttctatcctgagcagggtggtcagatttttgac
acagggattatagaagggtcatttggtacattcaacgtgtgcaatgtcaaaatattcggg
ggctttgttcttcatattggtagtctttctacagaaagtggagaggtatcggtgggggat
gaagtaacttgcaaggttgactatgagagacgtaaactcatcgctcctaatcatacttgt
acacatatgctgaattttgccctgaaggaagtgctcggggatcatattgatcagaagggg
tcaatagttcttcctgaaaaactacgatttgatttctcccatggtatgccggttgatcct
gaagatttgagaaagatcgagtccatagtgaatacacaaattaaggatgaattagaagta
tattcaaaggaatctgttctctctgaagccaagcgcatcaaaggtctaagagcagtgttt
ggagaagtctaccctgatcctgtcagagtggttgcaattgggagacgggtggaggacctc
ttggctgaccctgaaaacgatgaatggtcatcactttcatccgagttttgtggaggaacc
cacataacaaacacacgcgaagccaaagcgtttgctcttctatcagaggatggcatttcg
aaaggtattcgtaggataattgctgtcactactaaatctgcatttgatgctctgaatacg
gcgtctttgcttgaaaaagaagtagatgaggcatccaaggcggtgggaaatgcactagaa
aagaaagttaatgctttgaaaagacgagtagatgaagtagatatccctgcagccaaaagg
gcggatatcaaagccaagattgctcagcttcagaatgaagtgagaacagctcaaaagaaa
atagcaaaggaaaacctgaagaaatctgtagaaatagcaatagaggcagctgagtctgca
acatcagatgggaaaaacttctgcattgtccagcttgatgtgggacttgatgcagctgca
gttcgagaggccgtttcaaaagtgatgcaaaagaagggaatgtctgtaatggtgttcagc
acagatgaaagcacaaataaggcggttgtgtgtgctggagttccagacaaatctgatcag
ttcaagcaattagacgtcacagaatggctgcagtctgcgttaagtcccataaaagggaaa
tgcgggaaaggaaaaagtggtctcgcttcgggacagggaacggatgcttcccaggtgagt
tcggcagtggacctggctgcatcatttgcctcaatgaagctcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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