KEGG   Brassica napus (rape): 106381139
Entry
106381139         CDS       T04128                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106381139
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106381139
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106381139
NCBI-ProteinID: XP_013676462
UniProt: A0A078H545
Position
C2:16949484..16951371
AA seq 406 aa
MTLLHLSLSLFSCLLLVLGPTFIDSAHVSDPELVVQEVNQKINASRRNLGVLSCGTGNPI
DDCWRCDKKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPSDKDVVNPKPGTLRHAVI
QDEPLWIIFARDMVIKLKEELLMNSFKTIDGRGANVHIAGGACITAQYVTNIIIHGINIH
DCKKRGNAYVRDSPSHYGWRTASDGDAISIFGGSHVWVDHCSLSNCADGLVDAIHGSTAI
TISNNYLTHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPQSKWKKWNWRSEGDLFLNG
AFFTPAGGRASSSYAKASSLSARPSALVASVTGNAGALYCKKGSRC
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgacacttcttcacttgtctctctccctattctcatgtctcctccttgtcctaggtccg
accttcatcgactctgctcatgtctccgaccccgaactagtagttcaagaagtaaaccag
aagattaatgcgtctaggaggaatcttggtgtcctctcatgtgggacaggaaaccctatc
gatgattgttggagatgcgacaagaaatgggagaagaaccgacaacgactagctgattgt
gccattggatttggcaaacacgcaataggcggccgtgacggcaaaatctacgtggtgacc
gaccctagcgacaaagacgtggttaaccctaaaccgggaaccctaagacacgcagtgatc
caagacgagccgctatggatcatctttgcacgtgacatggtcataaaactgaaagaagag
ctgctcatgaactcgttcaagaccattgacggccgtggagcgaacgtccatatcgccggt
ggcgcgtgcatcactgcccagtacgtgaccaacatcatcatccacggcatcaacatccac
gactgcaagaagagagggaatgcttacgtcagagattctccgtcgcattacgggtggagg
acggcatctgacggtgacgctatctcgattttcggagggtcccacgtgtgggttgaccac
tgctcgttgtctaactgcgcggacggtctggtcgacgccattcatggatctacggctatt
acgatctctaataactacttgactcaccataacaaggtgatgcttttgggacacagtgat
tcgtacacgagagacaagaacatgcaagtcaccattgcgtttaatcattttggtgaaggg
cttgttcagagaatgcccagatgtaggcatggatattttcatgtggtaaataacgattat
acgcattggcaaatgtatgcaattggtgggagtgcagctccaactataaacagtcaaggc
aataggtttcttgctcccaatgaccatgtcttcaaagaggtgactaaatacgaagatgca
ccacaaagcaaatggaagaagtggaactggagatcagaaggtgaccttttcctaaacggt
gcgttttttacgcctgcgggtggaagagcctcttcgagctacgctaaggcttcaagtttg
tcggctagaccatccgcgttggtggcttccgtcacgggcaatgctggtgctctctactgt
aagaaaggatctcgatgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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