KEGG   Brassica napus (rape): 106382584
Entry
106382584         CDS       T04128                                 
Name
(RefSeq) probable pectate lyase 12
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106382584
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106382584
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106382584
NCBI-ProteinID: XP_013678071
Position
A9:33876991..33880501
AA seq 476 aa
MMLQRSCIVLFSLSLFVPHMGFAMLNKTLLLIPHPDPELVAHDVHWRVNASIWRRQAMDT
TDQAGSNQCFTGNPIDDCWKCDTNWPNNRQRLADCGIGFGQYALGGKGGRFYFVTDSSDD
DVVDPKPGTLRYGVIQVEPLWIVFPSNMMIKLKHELIFNSYKTLDGRGANVHIVGGGCIT
LQYVSNIIIHNIHIHHCHPSGNTNIRSSPTHYGLRTESDGDGISIFGSKDIWIDHCSLSR
CKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLVQRM
PRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDW
KGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVDPKSASFIDQITFHCGVLGVGGRNN
NLGMWTTTGSEGSGGLDSYNDYTDEMSGTGSTNRLSFSIIVIAFMFNLISYSFMLL
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgatgcttcaaagaagctgcattgtacttttctcactttctctgtttgttccacacatg
ggtttcgccatgctcaacaaaactctccttctcataccacatcccgacccagagctagtc
gctcatgatgttcattggagggttaatgcctctatatggagacgtcaagctatggatacg
acggaccaggccggttcaaatcagtgcttcacgggtaacccaatcgatgactgttggaaa
tgtgacacaaactggcctaataaccgacaaaggctagccgattgtggaatcggtttcgga
cagtatgccttgggaggcaaaggcggccggttttacttcgtcactgattcctccgacgat
gatgtcgtcgaccctaaaccgggcactctcagatatggagtgatacaagtagagccactg
tggatagtgttcccaagcaacatgatgataaaattaaagcatgagctaatattcaacagt
tacaagactcttgatggaagaggagctaatgttcatattgttggtggtggttgcatcacc
cttcaatatgtctccaatatcatcattcacaacattcatatccaccattgtcacccatcc
gggaatactaacatacggtcaagtccaacgcactacggattaagaacggaatcggacggt
gatggtatctccatcttcggatcaaaggacatatggattgaccattgttctctatcgaga
tgtaaagatgggttgatagatgctgtgatgggatccacagggattacaatatcgaacaac
ttcttctcacaccacaatgaagtcatgcttcttggtcacagcgatcactacgagccagac
agtggcatgcaggtaaccattgcgtttaatcactttggagagaaattggtacaaaggatg
ccacgatgtcgacgtggttatatccatgtggttaacaacgattttactcaatgggaaatg
tatgcgattggcggtagcggtaacccgaccattaatagtcagggtaaccgttataccgcc
ccaaccaacccctttgccaaagaggtgactaaaagagtagaaacgcctgatggcgattgg
aaagggtggaactggagatcggagggagacatcttggttaatggagcgttcttcgtggca
tctggagaaggtgctgagatgaggtacgagaaggcgtatagcgtggaccctaaatctgcc
tcgttcatcgaccaaatcacatttcattgcggcgttctcggcgttggtggcaggaataac
aatttggggatgtggactactactggatccgaaggtagtggcggtctagattcttataat
gactacaccgatgaaatgtctggcaccggttcaaccaaccggttatctttctcgattatt
gttatagctttcatgttcaatttgatatcatattcgttcatgttgttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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