KEGG   Brassica napus (rape): 106387534
Entry
106387534         CDS       T04128                                 
Name
(RefSeq) cell division control protein 48 homolog C
  KO
K14571  ribosome biogenesis ATPase
Organism
bna  Brassica napus (rape)
Pathway
bna03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106387534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bna03009]
    106387534
Ribosome biogenesis [BR:bna03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    106387534
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_2 AAA_14 RNA_helicase AAA_28 TIP49 AAA_33 nSTAND3 AAA_17 Vps4_C IstB_IS21 ATPase_2 AAA_18 Zeta_toxin Rad17 Viral_helicase1 Mg_chelatase Bac_DnaA ABC_tran Cytidylate_kin2 TsaE NB-ARC Parvo_NS1 AAA_11 Nucleolin_bd DUF4888
Other DBs
NCBI-GeneID: 106387534
NCBI-ProteinID: XP_013682858
Position
C3:complement(9097937..9101182)
AA seq 798 aa
MGRRENSRRDLSRAMDSCGKDLSTAEEIVDALRSRYGKYKRMSRQALVLNVRNVLDARNN
NKKRVKEDEEDDDSDEGAGGGKMKKQRRLDEQSHVERRNKEKSVSSSSSSSSSEDSGGHI
STSEDAKVSPRIDLTSDCLRGSYAKMNSSTKLAPPKQRRHSDEGAGGGKMKKQRRLDVKE
KSVSSSSSSEDSGGHISKLAPPGKVGPTFKDFGGIKKVMDELDQYILSPLLNPPLFGKIG
AKPPSGILFHGPPGCGKTRLANAVANEARVPFYQISATQLLSGVSGASEENIRRLFSKAY
RTAPSIVFIDEIDAIGSKRENQQRETEKRIVTQLLTCMDGPPPGGGEDTPAAAGYVVVIG
ATNTPDALDPALRRGRRFGREIALTPPDEHARAEILSLVAQRLRLEGSFDMKRIARLTPG
FVGADLEELADMAASLCVKRIMDSRKLQPSGDCDDDRSWLRLPWSDEDLDKLFVTMSDFE
EAVKLVKGSLTREGFSTVPDVSWDDVGGLGHLRSELNNYIVRPIKYPDMYEKFGKTLETG
FLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVGESERAIRTLFQRARTSSPCV
IFFDEVDALTARRGREGDHLVVGGLLNQFLTELHGGDRRDVYVIGATNRLDAIDPAFLRP
GRFGNLVYVPLPNADDRVSILKSIANKRPLDPSVDLDAIANKYCEGFSGADLANLMDKAI
HVAVKEKFQSIESSEDGDMDFSDCTIKMTHFKQALSSVTPSVSKQQIKHYEEQRKKFQSS
TGRNNMDKINVGPSFAHE
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggggaggagagagaatagtaggagagatttgagtcgagctatggattcgtgcgggaag
gatttatctacggcggaggaaatcgtggacgccctccgttccaggtacggtaaatataag
aggatgtcccgtcaagcacttgtcctcaacgtccgaaatgtccttgatgcccgaaacaac
aacaagaagcgtgtgaaagaagacgaagaggatgatgattctgatgaaggtgctggtggt
ggtaagatgaagaaacagagacgtcttgatgaacaatcacatgtcgagaggagaaacaaa
gagaagtcagtttcttcttcttcttcttcttcttcgtcggaagacagtggcggccatatc
tcgacttctgaggacgctaaggtgagtccaaggattgatttgaccagtgactgcttaaga
ggtagctacgctaagatgaatagctccacgaaacttgctcctcctaaacagagacgtcat
tctgatgaaggtgctggtggtggtaagatgaagaaacagagacgtcttgatgtcaaggag
aagtcagtttcttcttcttcttcgtcagaagacagtggcggccatatctcgaaacttgct
cctcctggtaaagtaggacctacttttaaagactttggcgggattaaaaaagtgatggat
gagttggatcagtatattctgtcccctcttctcaatcctccattgtttggcaagattgga
gcgaagccaccaagcgggattctattccatggaccacctggctgtggaaagactcgcttg
gccaatgccgtcgccaacgaagctcgtgttcccttttatcagatttcagccacacaactt
ctttctggtgtttctggtgcgtctgaagagaatattagaaggctcttctctaaagcttac
aggactgcgccttctattgtgtttatcgatgagattgatgcaattggttctaagagagag
aaccagcaaagggagacggagaagcggatcgtaacacaactattgacttgtatggatggg
cctcccccgggaggaggagaagatacgccggctgctgctggatatgttgttgtcattgga
gctactaatacccctgatgctcttgatcctgctctcagaaggggtaggcgattcgggcgt
gagattgctctaacccctcctgatgaacatgccagggctgagattctctctctcgttgcc
caaagacttagacttgaaggttcctttgacatgaaaagaatcgctcgcttaacaccaggt
tttgttggagctgatttggaggagttagctgacatggctgccagtctttgcgtaaagagg
atcatggattcaagaaaattgcaaccctccggtgactgtgatgatgatagatcttggctg
aggctgccctggtcagacgaagatttggataagctctttgtcacaatgtctgattttgag
gaagcagtcaagttagttaagggatctttaactagagaaggtttctctaccgtgcctgat
gtctcatgggatgatgttggtgggcttggccatctacggagtgaactcaacaattacata
gtcaggcctatcaaatatccagacatgtatgagaaatttggaaagacgttagagacaggt
ttcttgctctatggaccaccgggttgtggaaagactttggttgcaaaggcagttgcaaac
gaggcaggagctaatttcatacacatcaagggtccagaacttctaaataaatacgttgga
gaaagcgagcgtgctattcggaccttgtttcagcgcgcccggacaagctcaccatgtgta
atcttctttgatgaggtggatgctttgacagcaaggcgtggcagagaaggtgatcatttg
gttgttggtggtcttttgaaccagtttctcactgagctgcacggtggagatagacgtgac
gtttatgtcatcggagctacgaacaggctcgatgcgattgatcctgccttcttgagacca
ggtaggtttgggaatcttgtgtacgtacccctccctaacgcggatgaccgtgtttcgatc
ctaaaatctattgcaaacaagagacccttagatcctagtgttgatctggatgccattgca
aacaagtactgtgaaggtttcagcggagctgatctcgctaacctgatggacaaagctata
cacgtggctgtgaaggagaagttccagtccattgagtcgtctgaagatggcgatatggat
tttagtgattgcaccatcaagatgactcatttcaagcaagccttgtcctcagtcacacca
tctgtcagcaaacagcaaataaaacactacgaggaacaacggaagaaatttcaaagcagc
accggaagaaacaacatggacaaaatcaacgtaggaccatcttttgcccacgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (41)   

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