KEGG   Brassica napus (rape): 106392565
Entry
106392565         CDS       T04128                                 
Name
(RefSeq) ABC transporter B family member 1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bna00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    106392565
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bna02000]
    106392565
   04147 Exosome [BR:bna04147]
    106392565
   04090 CD molecules [BR:bna04090]
    106392565
Enzymes [BR:bna01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     106392565
Transporters [BR:bna02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    106392565
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   106392565
CD molecules [BR:bna04090]
 Proteins
  106392565
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 ABC_ATPase Zeta_toxin AAA_22 RsgA_GTPase AAA_29 AAA_15 AAA_21 AAA_5 nSTAND1 AAA_30 SbcC_Walker_B APS_kinase AAA_25 DUF87 PBP_N Rad17 DUF4349
Other DBs
NCBI-GeneID: 106392565
NCBI-ProteinID: XP_013688829
Position
C3:11874039..11879524
AA seq 1340 aa
MSQESVQIEEEIKSLEQWRWSEMQGLELLPEPSSNSNKNSRNPETELQEHPPEMENGGGT
PPPPPPATAEEPKKAEIRGVAFKELFRFADGLDYVLMTIGSVGAFVHGCSLPLFLRFFAD
LVNSFGSNANNVDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYL
EAALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFVSGFIVGFTAV
WQLALVTIAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGES
RASQAYSSALKTAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHLTNGGLA
IATMFAVMIGGLGLGQSVPSMAAFAKAKVAAAKIFRIIDHKPTIERNSVSGVELESVTGL
VELKNVDFSYPSRPDVKILNEFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV
LLDGHHLKTLKLKWLRQQIGLVSQEPALFATSIKENILLGRPDADQVEVEEAARVANAHS
FIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQE
ALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGIYSKLIKMQ
EAAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTTDFSLSVEAS
SYPNYRHDKLPFKDQANSFWRLAKMNSPEWKYALVGSVGSVICGSLSAFFAYVLSAVLSI
YYNPDHNYMIKQIDKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTKRVREKMLTAVLKN
EMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLAL
VLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRL
YTANLEPPLKRCFWKGQIAGSGYGVAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFM
VLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDLDTTPVPDRLRGEVELK
HIDFSYPSRPDIQVFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVLIDG
KDIRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHECATEAEIIQAATLASAHKFISA
LPDGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQ
ACCGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGIYARMIQLQRFTH
TQVIGMTSGSSSRVNKEDDA
NT seq 4023 nt   +upstreamnt  +downstreamnt
atgtcccaagaatctgttcagatagaagaagaaataaagtcattagaacaatggcgttgg
tccgaaatgcaaggacttgagcttctccctgaaccttcctcaaatagtaacaaaaactca
agaaacccagaaacagagctccaagaacatccgccggagatggaaaacggcggtggtact
cctcctcctcctcctccggcaacagcggaggagcctaaaaaagcagagattcgtggagtt
gcgttcaaagagctcttcagattcgcagatgggttagattatgtactgatgacaattggc
tctgttggtgctttcgtccatggctgctctttgcctctgttcctcagattcttcgccgat
ctcgttaactcctttggttctaacgctaataacgtcgacaagatgatgcaagaagttctc
aagtatgcgctttactttcttgtcgttggtgctgcaatctgggcttcctcctgggcagag
atttcgtgttggatgtggactggagagagacaaacaacgaagatgaggataaagtactta
gaagctgctttaaaccaagacattcagttcttcgacacagaggttcgaacttcagatgtt
gtctccgccattaacaccgacgctgttatggttcaagacgccatcagcgagaaattgggt
aatttcatccactacatggctacttttgtgtccggattcatcgtgggtttcacggcggtg
tggcaactagcgttggtgactatcgcggtggttccgttgatagctgtgatcggaggaatc
cacaccacaactctctctaagctctctaacaagagtcaagagtctctttctcaagctggt
aatatcgtcgaacagacagtggtgcagatcagggtagtaatggcttttgtcggagaatca
agagcctctcaagcttactcatcagctttgaagacagctcagaaactcggttacaaaaca
ggtttcgctaaaggaatgggacttggcgcgacttacttcgtcgtcttctgttgctacgct
ctcttgctctggtacggtggctatctcgtccgtcaccatttgaccaacggtggtctcgcc
atcgccaccatgttcgccgtcatgatcggtggcttggggttgggacaatcagtaccgagc
atggctgcgtttgcgaaagcaaaggttgctgctgcaaagatctttagaatcattgatcac
aagcccacgatagagcgtaacagcgtgtccggcgtggagctagagtctgtcacgggtctt
gtcgagcttaaaaacgttgacttttcgtacccttcaagaccagatgttaagatccttaac
gagttcacactctctgtacccgccgggaagactatagctttggttgggagcagtggttcg
ggcaaaagcactgtcgtttcgcttatcgagaggttttacgacccgacctcaggacaagtt
ttactagacgggcaccacctgaagacacttaaacttaaatggttaaggcaacagatcggt
cttgtgagccaagaaccagccttgttcgccacttccatcaaagagaacatactcttagga
cgtcccgacgcagatcaagtcgaggtagaagaggcagctcgagtcgcaaatgctcattcc
ttcatcatcaaactacctgatggcttcgacacacaggttggggagagaggactgcaactt
tcaggtggacagaagcaaagaatagcgatagcaagagccatgttaaagaacccggcgata
cttttactagacgaggccacaagcgctttggattctgaatcagagaagctagtgcaagaa
gctttggatcggttcatgatcggaaggacaacactcatcatcgctcaccgcctctccacc
atccgcaaagctgaccttgtagctgtgcttcagcaaggaagcgtctctgagattggaaca
cacgacgagcttttcgccaagggagagaatggtatctactccaagcttattaaaatgcaa
gaggcagctcatgaaaccgccatgaacaacgcaagaaagagtagtgctagaccgtctagt
gctagaaactcggttagctcgccgataatagctcggaactcttcttatggaaggtcaccg
tattcgcggagactctccgacttctcaactactgacttcagcctctccgtcgaagcttct
tcctacccgaactaccgacacgataagctacccttcaaggaccaagccaactccttctgg
cggctagcgaaaatgaactctccggagtggaaatacgctctcgtcggttctgtaggctct
gtcatctgcggctcgctcagcgccttctttgcatacgtcctcagcgcggtcctaagcatc
tactacaacccggaccacaactacatgatcaagcagattgacaagtactgttacctcttg
atcggtctctcttctgcggcactcatcttcaacacgctccagcattctttctgggacatt
gtgggggagaatctcaccaagagggtccgtgagaagatgcttaccgctgtgctcaagaac
gagatggcttggtttgatcaagaggagaatgagagcgcgagaatctcggcgaggttggct
cttgatgctaataacgtgaggtcagctattggagataggatctctgtcattgtgcagaac
acagcgttgatgcttgttgcttgcactgctgggtttgttctgcaatggagacttgcactt
gtcttggtcgcagttttccctgttgttgttgctgcaactgtcttacagaaaatgttcatg
actggattctctggagaccttgaagcagcgcatgccaagggaacacagctggctggtgaa
gccatagctaatgtcagaacagtagcagctttcaactcagaggcaaagattgttcgtctc
tacactgcaaacctcgaaccaccactgaaacgctgcttctggaaaggacagatcgctgga
agtggctacggtgtagctcagttctgtctctacgcatcttacgctctagggctatggtac
gcgtcgtggcttgtgaaacacggcatctccgacttctccaaaaccataagagtcttcatg
gttctgatggtctcagctaacggtgcagcagagacgctcacactagctcctgatttcatc
aaaggcggtcaggcaatgaggtctgttttcgaacttcttgatcgaaaaaccgagattgag
ccggatgatctcgataccacgccggttccagaccggttacgcggcgaagtcgagctgaaa
cacattgatttctcttacccgtcgagaccagacatacaagttttccgtgatcttagcctt
cgtgctagagctggcaagactctggcccttgtcggtccgagtgggtgcggtaaaagttcg
gtcatctccctcatccagagattctacgaaccgtcctcaggccgtgtcctgatagacggg
aaagacataaggaagtacaacttgaaggccataaggaaacacatagccatagtccctcaa
gagccttgcttgttcggcacgacaatatacgaaaacatcgcatacggacacgaatgcgcg
acagaagcagagatcatccaagccgcgacgctagccagcgcgcacaagttcatatccgcg
ttgcctgatggctacaagacttatgtcggagagagaggcgttcagctgtcgggaggacag
aaacagaggatagcgatagctcgtgccttggtgaggaaggcagagatcatgctgcttgat
gaggccacaagtgctcttgatgctgagtcagagaggtcggtgcaagaagcattggaccag
gcttgttgtggtagaacgtccattgtcgtggctcataggttgtctacaatcaggaacgca
catgttatcgcggtgattgatgatggtaaagttgcggaacaaggttcgcattctcatctt
ctcaagaactatcctgatggaatctacgcgaggatgatacagttgcagaggtttacgcat
actcaggtgattggtatgacgtcagggtcgagttctagggttaataaggaagatgatgct
tag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (35)   

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