KEGG   Brassica napus (rape): 106394343
Entry
106394343         CDS       T04128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: fumarate hydratase 1, mitochondrial
  KO
K01679  fumarate hydratase, class II [EC:4.2.1.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00020  Citrate cycle (TCA cycle)
bna00620  Pyruvate metabolism
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
Module
bna_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bna_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    106394343
   00620 Pyruvate metabolism
    106394343
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.2  fumarate hydratase
     106394343
SSDB
Motif
Pfam: Lyase_1 FumaraseC_C
Other DBs
NCBI-GeneID: 106394343
NCBI-ProteinID: XP_048634822
Position
A4:22006338..22013762
AA seq 527 aa
MRAGVVVPALGGISHVAIQFPTYETCLTKKGLSLISPSVISKLSTTSVPTMAINVASRRL
SSGTALRRAMRSYSTFREERDTFGPIQVPSDKXRGSLSLQNFEIGGERERMPEPIVRAFG
VLKKCAAKVNMEYGLDPTIGKAIMQAAQEVALXDHFPLVVWQTGSGTQSNMNANEVIANR
AAEILGGDKCVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPSLKTLHSTLHSKSFQ
FKDIVKIGRTHTQDATPLTLGQEFGGYATQVKYGLNRVTCTLPRLYQLAQGGTAVGTGLN
TKKGFDVKIAAAVAEETNLPFVTAENKFEALAAHDACVETSGSLNTIATSLMKIANDIRF
LGSGPRCGLGELVLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFE
LNVFKPVIASALLHSIRLVADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIG
YDNAAAVAKKAHKEGSTLKEAALKLGVLTAEEFDTLVVPEKMIGPSD
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgagagcgggtgtagttgtgcctgcactaggtggtattagtcacgttgccattcagttt
cctacgtatgagacctgcttgaccaaaaaagggctatctttaatctctccgtctgtcata
tcgaaactctccaccacctccgtccccacaatggcgattaacgtcgcttcacggcgtctc
tccagcggaacagcgctgcggcgtgctatgagatcttattcaacgtttagggaggagaga
gacaccttcggcccgatccaagttccttccgataagnttcggggatctctctctcttcag
aacttcgagatcggtggtgagcgcgagcgtatgcccgagcctatcgtccgcgcttttggc
gtcttgaagaagtgcgccgccaaggttaacatggagtatggtcttgatccaacaattggg
aaagccattatgcaagctgctcaggaagttgctctatgagatcatttcccccttgttgtt
tggcaaactggtagtggcactcagagtaacatgaatgctaatgaggtcattgctaacaga
gcagctgagattcttggtggtgataaatgtgtccaccctaatgaccatgtcaaccgatct
caatcctctaacgacactttccctactgtcatgcacattgcagctgcaactgagattaat
tcaaggctcatccctagtttgaaaactttgcattccactctccactctaagtccttccag
ttcaaagatattgtgaaaattggaagaactcacactcaagatgctactcctttgacgcta
ggacaagaatttggtggctacgctactcaagttaagtatgggcttaatagggtcacatgc
actctaccccgcctctatcagcttgcacaaggtggaactgctgttggaacaggattaaac
accaagaaagggtttgacgtaaagatagctgctgcagtagccgaagaaacaaacttgccg
tttgtcactgcggaaaacaagttcgaagctctggctgcacacgatgcttgtgttgaaacc
agtgggtcacttaacacaatcgccacatccttgatgaagatcgccaatgatatacgtttt
cttggaagtggcccaagatgtggtcttggtgagcttgttctgcctgaaaacgagccagga
agcagcatcatgcctgggaaggttaatcctacacaatgtgaggccttgactatggtttgt
gctcaggttatgggcaatcatgtagctgtgacagttggtgggtcaaatggtcatttcgaa
ttgaatgtatttaagccagtgatcgcaagcgctcttttgcattccattagattggtagca
gatgcctcagcttcgtttgagaaaaactgtgtgaggggaattgaggccaacagagaacgg
atctcaaagctattgcatgagtcccttatgcttgtgacatcattgaatccgaaaatcgga
tatgacaatgctgcagcagttgccaagaaagctcacaaagaaggatctacattgaaggaa
gcggctctgaagttgggtgttctgacggcagaagagtttgatacacttgttgttcccgag
aagatgatcggtccctctgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system