KEGG   Brassica napus (rape): 106396295
Entry
106396295         CDS       T04128                                 
Name
(RefSeq) nuclear pore complex protein NUP62
  KO
K14306  nuclear pore complex protein Nup62
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106396295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106396295
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106396295
SSDB
Motif
Pfam: Nsp1_C Nucleoporin_FG ATG17_like
Other DBs
NCBI-GeneID: 106396295
NCBI-ProteinID: XP_013692099
UniProt: A0A816J5V0
Position
C4:4724831..4728222
AA seq 719 aa
MSGFSFGQSNTGGGSLFGSSSAASSSSASSTSSPLAFSFNQSTGFGFGSTAQAAPASSTT
PSFGFGATASAPASSTTPSFGFGATASAPAASTTPSFGFGATSSAPASSTTPPFGFGATA
STVTAPASSTTPSFGFGAPASTGFGFGSSAASSSGSAPSLFGSSTNASAASPGSSPFGFV
TSSASQPGASSSSATVSAPSPFGAAPASGSAPLFGSSSSLFSAPSSAASSSSPLFATSSS
VPASTASLFGAQSSATASTPSMFGAAAPFSSAPGSTPSMFGSSSASGTSQSIFGSAASSA
SGSSPSIFGATGSTQAIFGSSSLSGAAAASSPSQFGFSTNNTSSTITNPLASPFSASTGL
SFSKSTGSSTPAISPSAPSQTTSSSSSFSFATPASSAPASTTSPALFSIATTTTTTSSST
PAATSAPSSSAAASTTTFPSFGVGSSAANSTPATSSAPAFGFTSSTSAAATTAFAVPQTT
PTTATTTQTSLVVASTSGTSTSVAAPVAAAPKLPSEITGKTVEEIIKEWNTELEERTGRF
RKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIDTHQQEVDKALLSME
EEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQIRSIIQSVNANQGGELE
AVDGMNALDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQGSGADRELMMAPKHWMS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgtctgggttttcgtttggtcaatcgaacaccggtggaggatccttgttcggatcttcc
tccgccgcgagctcctcgtctgcttcatccacctcatctccgttagctttctccttcaat
cagtccaccggatttggattcggttccaccgcacaggctgctcctgcttcctctacaact
ccatcgttcggattcggagccaccgcatcggctcctgcttcctccacaactccgtcgttt
ggatttggagccaccgcttcggctcctgctgcttctacaactccatcgttcggatttgga
gccacctcatcggctcctgcttcctccacaactccgccgtttggatttggagccaccgca
tctaccgtaacggctcctgcttcctccacgactccatcgtttggattcggagcacccgca
tccaccggattcgggttcggatcctctgctgcgtcttcatctggttctgctccctcgttg
tttggatcttctaccaatgcttctgcggcttctcctggttcttctcctttcggattcgta
acttcatctgcttctcagcctggcgcttcttcttcttccgcgactgtttcagcaccatct
cctttcggagcagcgcctgccagtggttcagcgccactctttggatcttcctcatcctta
ttctccgctccttcatctgcagccagctcgagttctcctctcttcgccacatcctcatct
gtacctgcctcaaccgcttctctattcggcgcacaatcttcagccaccgcctccacacct
tcaatgttcggcgctgcggctccgttctcatcagcccctggctccacaccttcaatgttt
ggatcctcatcagcctctggcacctcacagtcaatctttggctcggccgcgtcatcagcc
tctggctcctcaccgtcaatctttggagccaccggttcgactcaggccatcttcggatcg
tcttccttgtcaggcgcagcagcagcttcttcaccatcccagtttggattttccaccaac
aacacttcctccactataaccaatcccttggcttctccgttctctgcttctaccggactc
tctttctcgaaaagcacaggaagttccacccctgctatctccccttccgctccttcacaa
acgacttcgtcatcttcctcattctcatttgctacacccgcaagctcagctcctgcatcc
accacatccccagcactgttctctatagcaaccaccaccaccaccacgtcctcttcgact
cctgctgccactagtgcaccatcttcctcagctgcagcctctacaacgacctttccttct
tttggtgtgggttcatctgcagccaacagcactccggctacttcctctgctccagcattt
gggtttaccagctccacttctgccgctgcaactactgcttttgctgtaccccaaacaaca
ccaactactgctactacaacgcagacatctcttgttgtggcttccactagtgggacaagc
acatctgttgcagctccagtggctgctgctcccaagctaccatctgaaataactggcaaa
actgttgaggagattatcaaggaatggaatactgagctggaggagcgtacagggagattc
aggaaacaggcaaatgcgatagctgaatgggataagcggatcctgcagaaccgtgatgtt
cttttgaggcttgagattgaagttgcaaaagtggttgaaacacagtctagtttggaaaga
cagctggaattaatcgacactcatcaacaagaggttgacaaagctttgctaagcatggag
gaagaggctgagcgtatatataatgacgagcgcaaatcgcttcttgacgatgaagcagca
tcaacaagagatgcaatgtatgaacagtctgagcttgtagaaagagaactggagcatatg
actgaacaaatcagatcgataatacaatccgtaaatgcaaaccagggtggagaactagaa
gcagttgatgggatgaatgcattggacgtagtagtcaggatcttgaacaatcaactcagt
tccttgatgtggattgatgagaaagcagaggaattctcatctcggattcaaaagatcgca
tctcaaggctctggtgcagaccgtgaactgatgatggctccaaagcactggatgtcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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