KEGG   Brassica napus (rape): 106396901
Entry
106396901         CDS       T04128                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
bna  Brassica napus (rape)
Pathway
bna04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106396901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106396901
Membrane trafficking [BR:bna04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    106396901
SSDB
Motif
Pfam: Sec1 YxiJ
Other DBs
NCBI-GeneID: 106396901
NCBI-ProteinID: XP_048611660
Position
A2:13387641..13390970
AA seq 569 aa
MALVTSVRDYINRMLQDISGMKVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISAS
NESMSHLKAVYFVRPTSENVQKLRHQLANPRFGEYHLFFSNLLKDTQIHILADSDEQEVV
QQVQEFYADFVAGDPYHFTLNMAANHLYMLPAVVDPSGLQRYSDRVVDGIAAVFLALKRR
PVIRYQRTSDTAKRIAQETAKLMYQQESGLFDFRRTESSPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGLQDNKVDLRAIGSLPKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRM
VDDFQQVAKSNQNIQTVEDMARFVDNYPEYKKMQGNVSKHVTLVTEMSKLVEARKLMLVS
QTEQDLACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLA
SRSPKYKQGLVQFLLKQAGVEKRSGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQ
TMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRCVALQNSTNSGIRFIL
GGTAVLNSKRFLMDLEEAQRISRSGSHMV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcgctggtaacatccgtgcgcgattacatcaaccggatgcttcaggatatctccggc
atgaaggttctcatactcgactccgaaacggtgagcaatgtaagcatcgtgtattcgcaa
tcagagctgctccagaaagaagttttcctcgtggagatgatagattcgatatcggcgtcg
aatgaatcgatgtcgcatctgaaagctgtttatttcgtccgtccgacgtcggagaatgtt
cagaagctgcggcaccagcttgcgaatcctagatttggagaataccatttatttttctcc
aacctgttgaaggatactcagattcatattttggctgattctgatgagcaagaggttgta
caacaagttcaggagttttatgcagactttgttgctggtgatccgtatcatttcactttg
aatatggcagcaaaccacctatatatgctcccagcagttgtcgatccctctggtttgcaa
cgctactccgaccgggttgttgatggaattgcggctgtctttctggcgttgaaacgtaga
cctgtcatcagataccagaggacctctgatactgctaaaaggattgcacaggaaacagct
aaattgatgtatcagcaagaaagcggtctttttgacttcagacgcactgaaagctctccg
ttgctgcttgtaattgacagaagagatgacccagttaccccattactgaatcagtggaca
tatcaggcaatggtgcacgaactcataggacttcaagataataaagtagacttgagagcc
attggaagtcttccaaaagatcagcaagttgaggtggttttatcatcagaacaggatgca
ttcttcaaatcaaacatgtacgaaaattttggggatattggaatgaacatcaagcgaatg
gtagatgactttcagcaggtggctaagagtaaccaaaatatccagacagtagaggacatg
gccagatttgttgacaactaccctgagtacaaaaagatgcaaggcaacgtctcaaagcat
gtgaccctggttactgaaatgagcaagcttgttgaagcaaggaaactgatgctggtttca
caaacagagcaggacttggcttgcaatggtggccaaggagctgcgtatgaggcagttacg
gatctcttaaacaatgaaagtgtgtctgacatcgaccggctacgtttggtgatgctgtat
gctctgcgctatgagaaagagaatcccgttcagttgatgcaactgttcaacaaattggct
tcacgctctcccaagtacaaacaagggcttgttcaatttctcttgaaacaagccggcgta
gaaaagcgttctggtgatctgtttggaaacagagatcttttgaatatagcacgcaatatg
gctcgtggacttaagggggttgagaatgtgtacactcaacatcagccacttttgtttcaa
acgatggagagcataaccagagggagattgcgtgatgtggattacccctttgttggagat
cattttcaacagggacggccacaagaggtggtgatattcatggttggtggaacaacgtac
gaggaatcacgctgcgttgctctacaaaactcgaccaactccgggattcggtttattctg
ggcggcaccgcagtgcttaattccaagaggtttctcatggacttggaagaagcacaaagg
atatcaagatcaggtagccatatggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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