KEGG   Brassica napus (rape): 106399968
Entry
106399968         CDS       T04128                                 
Name
(RefSeq) probable pectate lyase 3
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106399968
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106399968
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 106399968
NCBI-ProteinID: XP_013695852
UniProt: A0A078HPI4
Position
C5:complement(7002681..7005115)
AA seq 459 aa
MAAAFLNIGSYVFVFFLSSLATLAPQVQANIAVFDDYWTQRQGDALKQTLASFDPYPLNV
TNHLNYHVALALDTAESINSTRRELSQARRGRKMQNRRGKCVAHNPIDKCWRCDRDWEKN
RKKLAVCALGFGRRTSGGKDGPIYVVTDASDDELISPRPGTLRHAVTRDGPLWIIFARSM
VIKLQQELMMTSDKTIDGRGARVYIMGGSGLTLQFVNNVIVHNIYIKQIVPANGGLIRDS
EQHIGLRTRSDGDGINLFGATNVWIDHVSMTRCSDGMIDAILGSTAVTVSNSHFTDHQEV
MLFGANDKHEIDKKMQITVAFNHFGKRLEQRMPRVRFGTIHVVNNDYTHWEMYAIGGNMN
PTIISHGNRFIAPPNEQAKQITKREYTSYVDWKLWNWQSEGDYFLNGAYFVQSGKPNAWS
PKPKNPIPNKFAIRPKPGTMVRKLTMDAGVLGCKQGQAC
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcagcagcgtttttgaatattggcagctacgttttcgtcttcttcttatcgtcatta
gccacattagcaccacaggttcaagccaatattgccgtcttcgacgactactggacgcag
cgtcaaggcgatgcgttgaaacaaactttggcctctttcgatccttatcctcttaacgtc
accaaccacttgaattaccatgtcgctttagcacttgacaccgcggaatcaatcaacagc
acaagaagagagctttcacaggcgagacgtggtcgtaaaatgcaaaacagaagaggaaaa
tgcgtagctcataacccgatagacaaatgctggagatgcgaccgtgattgggaaaagaac
cgtaagaaactagcggtctgtgccctcggattcggcaggagaaccagcggaggaaaagac
ggaccgatctacgtagtcaccgatgcctcagacgacgaacttatcagccctaggccagga
acattaagacacgcggtgacacgagacggaccgctttggatcatcttcgcaagaagtatg
gtcataaaactgcaacaggaactgatgatgacgagcgataaaacgatcgatggacgtgga
gctagggtgtacatcatgggaggttctggattaacgctgcagtttgtgaataatgtgatc
gtacacaatatctatatcaagcagattgttcccgcgaacggcggtttgatcagagactcc
gagcaacatatagggctcaggacaagaagtgatggtgatggaatcaatttgtttggagca
actaatgtttggatcgatcatgtctcgatgacgagatgttctgatggtatgattgatgcg
attctaggatccactgcagtgactgtctccaacagccacttcacggaccaccaagaggtg
atgctttttggggccaatgacaaacacgagatcgacaagaagatgcagataacagttgca
ttcaaccactttggtaagagactggaacagagaatgccccgggtcagattcggaacgata
catgtggtgaacaatgactacacacattgggaaatgtatgcaattggtggaaacatgaac
cctacaatcattagtcatggcaaccgtttcatcgctccgcctaacgaacaagccaaacag
atcacaaagagagagtacacttcttacgttgattggaaactttggaactggcaatcagaa
ggagattacttcctgaatggagcttactttgtgcaatccggtaaacctaatgcgtggagc
cctaaaccgaagaaccctatcccgaacaagtttgcgatccgacctaagccgggaacgatg
gtccgtaaactcaccatggacgcaggagtactgggctgcaaacaaggtcaagcctgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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