KEGG   Brassica napus (rape): 106402727
Entry
106402727         CDS       T04128                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g01740
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106402727
   03029 Mitochondrial biogenesis [BR:bna03029]
    106402727
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    106402727
Mitochondrial biogenesis [BR:bna03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106402727
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27
Other DBs
NCBI-GeneID: 106402727
NCBI-ProteinID: XP_013698965
Position
C9:complement(24262318..24264096)
AA seq 558 aa
MVREALQFLSRLRKSSSFPDPLTCNKHIHRLINSCCGVLSLKLVAYLVSRGYTPHRSSFN
SIVSLLCKSGQVKFAEDIVRAMPKFGSLPDVVSYNSLIDGYCRNGDVGNASLVFERLRRV
SDGLFICRPDVVSFNSLFNGFGKKKMLVEVFVYMGVMFKCCSPNVVTYSTWIDAFCKSGE
LELGLKSFRFMKRDGLAPNVVTFTCLIDGYCKSGVGLEVAVSLYEEMRRAGMSINVVTYS
ALIDGFCKQGEMQRGEELYLQMRDDGLEPNSLVYTAFIDGYFKNGDADNAMKFLAKMLNQ
GMKLDTAAYGVIVSGLCGNGKVKEAAEVVDDMEKGGLLPDEMILTTMMNGYFKSGRVKDA
VKVYGEFIARGFEPDVVALTALIDGLAKSGRLHEAVAYFCKERANDVMYTVVIDALCKEG
DFIEVERLFEAGLVADKFMYTCWIAGLCKQGNLVGAFKLKTKMVQEGLELDLLTCTTFIN
GLASKGLMVEARQVFDEMLRREIRPDSAVFDLLIRAYEKEGDITAASELFLDMQTRGLVT
VVSDADCSKQCDNEVTCT
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggtcagagaagctctccaatttctctctcgcctgagaaagtcttcgtctttcccagac
ccactcacctgcaacaagcacatccatcggctcatcaactcctgctgcggcgtcctctct
ctcaaactcgtagcttacctagtctccagaggctacactcctcatcgctcttccttcaat
tcaatcgtatcgcttctttgcaaatcagggcaggttaaattcgctgaagacatcgttcgg
gccatgcccaagttcggatctttaccagatgttgtgtcttataactctctgatcgatggg
tactgtagaaacggcgatgtgggtaatgctagtttggtgtttgagaggctaagaagagtc
tctgatggtttgtttatctgcagacctgatgtggttagcttcaactccttgtttaatggg
tttggcaagaagaagatgttggtggaggtttttgtgtatatgggtgttatgttcaagtgc
tgttcgccgaatgttgttacttacagtacttggatcgacgcgttctgcaaatccggggag
ttggaattggggttgaagagctttaggtttatgaagagagatggtttggctccaaatgtg
gttactttcacttgtttgatcgacgggtattgcaaatccggggtgggcttggaggttgcg
gtttcgctatacgaagaaatgagacgcgctgggatgtctattaacgttgttacttacagt
gcgttgatagatgggttctgcaaacaaggggaaatgcagaggggcgaggagttgtatttg
caaatgcgcgatgatggattggagcctaactctcttgtatacaccgcgtttatcgacggg
tatttcaagaatggcgatgctgataacgccatgaagtttcttgccaaaatgcttaaccaa
gggatgaagcttgataccgcggcttacggtgtaatcgtatcgggactctgcggtaacggt
aaagtgaaggaggcagcagaggtggtagatgatatggagaaaggtggtttacttcccgat
gagatgattttgacgacgatgatgaatggttattttaaatccgggcgggtgaaggatgcg
gttaaggtgtacggcgagttcatagcgagagggtttgagcctgatgttgtagcgcttacg
gctctgatcgatgggcttgcgaagagcgggcggctacatgaagctgtagcttatttctgc
aaggagagagctaatgatgttatgtacaccgtggttatcgatgctttgtgcaaagaagga
gactttatagaagttgagagactctttgaagctggacttgttgcggataagttcatgtac
acttgttggattgctggtttgtgtaagcaagggaacttggtgggtgcgtttaagttaaaa
accaaaatggttcaagagggtctcgagctcgacttgctgacgtgcacgacatttatcaac
ggtttagctagcaaggggttgatggtggaggctagacaggttttcgacgaaatgctgaga
agagagattagacctgattcagctgtgtttgatctgttgattagagcttatgaaaaagag
ggagacataactgctgcttcagagttgtttcttgatatgcaaacgagagggcttgtaaca
gtggtaagtgatgcggattgcagtaaacaatgtgacaatgaagtcacctgtacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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