KEGG   Brassica napus (rape): 106409466
Entry
106409466         CDS       T04128                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform-like isoform X1
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bna  Brassica napus (rape)
Pathway
bna03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106409466
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106409466
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106409466
   03036 Chromosome and associated proteins [BR:bna03036]
    106409466
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     106409466
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     106409466
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     106409466
SSDB
Motif
Pfam: B56 DUF6724 TetR_C_16 Glyco_hydro_38N
Other DBs
NCBI-GeneID: 106409466
NCBI-ProteinID: XP_013705551
UniProt: A0A078F3H9
Position
C6:complement(25135887..25138082)
AA seq 489 aa
MLNKIMKLGGKKFNKSDQDNTSGVNTVVRSSRPTTAAATPSSTGESQSAAPSPSQTPNHP
MFTAPPSLEVLPLLKDVSSSDRPLLFMKKAHMCSCQCDFSDSLIMPREKEIKRQTLLELV
DFLHSSSGKVNETMQSELIRMVSANMFRCLPPAHYENTGAPPEGNDPEEEEPYLEPWWPH
LQLVYELLLRYVVSSEIEPKTAKKFINHTFVSRLLDLFDSEDPREREYLKTVLHRIYGKF
IFHRPFIRCSIYNIFYKYLYETERCVGIGELLEIIGSVINGFTVPMREEHVLYLVKAILP
LHKSKGISIFHQQLSYCVVQFVEKDYKLADTVIRGLLKYWPLTNCNKEVLFLGELEEVLD
VTEPSEFQHCVVPLFRQIGKCLNSANFQVAERALFLWNNEHIVGLIAENKDVIFPIIFEA
LERNMKGHWNQAVHGLSENVRRMFMEMDTELFEECEKQHAENEAKASELLEQREMTWKRL
EEAASLAAN
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgttgaacaagatcatgaaactgggcgggaagaaattcaacaaatcagatcaagacaac
acctccggcgtcaacaccgtcgtccgcagcagccgccccacaaccgctgccgcgactcca
tcatcaaccggcgaatcacaatccgcggctccgtcgccttcacagacaccaaaccaccca
atgttcacagcaccaccttccctcgaagtgcttccactgctaaaagacgtctcttcctcg
gatcgtcctctcctcttcatgaagaaggctcacatgtgttcttgccaatgcgacttctca
gactcactgatcatgccgcgcgagaaagagatcaagaggcagacgcttctcgagctcgtc
gacttcctccactcttcgtcaggcaaagtgaacgagacaatgcagagcgagctcataaga
atggtctcagcgaacatgttcaggtgtctcccgcctgcgcattacgagaacaccggagct
cctcctgaaggtaacgatcccgaagaggaggagccttatcttgagccatggtggcctcat
ctgcagcttgtttacgagcttctcttgcgttacgttgtgtcttctgagatagagcccaag
actgctaagaagttcatcaaccacacctttgtctcgaggctgctcgatctgttcgactcc
gaggatcctagggagagggagtacttgaaaactgtccttcacaggatctacgggaagttc
atattccaccgtccgttcatcaggtgctccatttacaacatcttctacaagtacttgtat
gagactgagaggtgtgttggaatcggagagttgctggagattatcgggagtgtgatcaat
gggtttacagtaccgatgagagaggagcatgtactgtatcttgtgaaagccattttgccg
ctgcacaagtctaaaggcatctccattttccaccagcagttgtcgtattgcgtggtgcag
tttgtggagaaagattacaagttggctgatactgtgatccgtgggctgttgaagtactgg
ccgcttacgaattgtaataaggaggttctgttcttgggagagcttgaagaggttttggat
gttacagagccttcagagtttcagcattgtgttgttcctctttttagacagattgggaag
tgtcttaacagcgcaaacttccaggttgcagagagagctcttttcttgtggaacaatgag
catatcgtagggctgatagctgagaacaaagatgtgatctttccgataatctttgaggcg
ttggagaggaacatgaaagggcattggaaccaagcggtgcatggtttgtctgagaatgtt
aggagaatgtttatggagatggacactgagttgtttgaagagtgtgagaagcaacatgcg
gagaatgaagctaaggcttctgagttgttggaacaaagagagatgacatggaagagactt
gaagaggctgcttctttagctgcaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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