KEGG T04128: 106410074

Brassica napus (rape): 106410074

Entry

106410074         CDS       T04128

Name

(RefSeq) NF-X1-type zinc finger protein NFXL1-like

K12236

transcriptional repressor NF-X1

Organism

bna Brassica napus (rape)

Brite

KEGG Orthology (KO) [BR:bna00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    106410074
   04121 Ubiquitin system [BR:bna04121]
    106410074
Transcription factors [BR:bna03000]
Eukaryotic type
  Zinc finger
   Other zinc fingers
    106410074
Ubiquitin system [BR:bna04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   NFX1 proteins
    106410074

SSDB

Motif

Pfam:

zf-NF-X1 NCBP3

Other DBs

NCBI-GeneID:

106410074

NCBI-ProteinID:

XP_013706028

Position

C8:complement(25848378..25852564)

AA seq 1107 aa
MSSQVRRDRPRSNPQQTWVPRGAAVVNEPSLPPPANTDRASETLDPAAAAASRPLRQRNG
SGRPSYNQHQRSNFAGPPPQPNRQRRNNAPGILPQRVASRTRPVNQGKMVVKEEENTVLT
DASLPQLVQELQDKLVKSSIECMICYDMVGRSANIWSCSSCYSIFHMHCIKKWARAPTSV
DLLAEKNQGDNWRCPGCQSVQLTSSREICYRCFCGKRKDPPSDPYLTPHSCGEPCGKPLE
REVSAVAEMDRDDLCPHVCVLQCHPGPCPPCKAFAPPRSCPCGKKMIHTRCSERRSVLVC
GQRCEKLLDCGRHRCERTCHVGPCDPCQVPVNATCFCKKKAETVICGEMNVKGELKADDG
VYSCNFNCGKPLGCGNHFCSEVCHPGPCGDCELLPSRVKTCYCGKTRLEEQSRSRCLDPI
PSCSNTCRKVLPCGLHTCNEVCHSGDCPPCLVKVNQKCRCGSSFRTVECYFTTSSETEKF
VCAKSCGRKKNCGRHRCSERCCPLLNAKKNDLSGDWDPHACQLPCGKNLRCGQHSCESSC
HSGHCPPCLEMIFTDLTCACGRTSIPPPLPCGTPVPSCQLPCSIPQPCGHSATHGCHFGD
CPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGLHACARTCHPEPCDGYNE
SEAVSRVTCGQTCGAPRRDCRHVCAALCHPSLPCPDSRCEFPVTITCSCGRLTATVPCDA
GGESAGNLRVGSVNETSVLNKLPTPFQPVESSDNRIPLGQRKLSCDDECAKQERKRVLQD
AFDITTPNLDSLHFSENSAMTEIISDIYRRDPKWVLAVEERFKFLVLGKARGSTSALKVH
VFCPMQKDKLDTVRLLAERWKLAVSNGGWEPKKFIVVHVTQKSKPPTRIIGARGGAISVG
GPHPPSFDPLVDMDPRLVVSLLDLPREANVSAVVLRFGGECELVWLNDKNALAVFHDPAR
AATAMRRLDHGSVYNGAVVVQNAAQSQSLGNNAWGKLPSSSSWDVQKANPWKKAVIQESD
DSWGADDSPIGGSSTDTQAYAWRSATSNAPIVTSANRWSVLEPEKPKTSALEPLVQSGES
SSSEATGKKLVEGSGEEVVDDWEKVCE

NT seq 3324 nt +upstreamnt +downstreamnt
atgagctctcaagtcagaagagacaggcctcgttccaatcctcagcaaacatgggttcct
agaggtgcagcggttgtgaatgagccttctttacctcctcctgctaatacagaccgagct
tcagaaacacttgaccctgctgctgctgctgcttcacgtcctcttcggcagcgcaacggt
tctggtcgtccctcctataaccagcaccaaaggagtaattttgctggtccacctcctcaa
cctaatcgacaaagaagaaacaatgctccgggaattttgccccaaagagttgcgtctagg
actcggcctgtgaatcaggggaaaatggtggttaaggaggaggagaacactgtgttgaca
gacgcgagcttgcctcagcttgttcaagagttacaagataagctggtgaagagctctatt
gagtgtatgatttgttatgacatggttgggcggtcagcgaatatatggtcttgctcaagc
tgttactccatcttccacatgcattgtatcaagaaatgggctcgagcaccgacttctgtt
gatctgttggctgagaagaatcaaggtgataattggaggtgtcctggttgtcaatctgtg
cagctgacgtcgtcaagagagatatgttatcggtgcttttgtgggaagagaaaagatcct
ccatctgatccgtatctgactcctcactcatgcggggagccatgtgggaagccgctggag
agagaggtttctgcggtagctgagatggatagagatgatctttgtcctcatgtctgtgtc
ctgcagtgtcaccctggtccatgtcctccctgtaaagcgtttgctccacctcggagttgt
ccttgtggcaaaaagatgattcatactcgatgctctgagcggagatctgttcttgtttgt
gggcagcgttgcgagaagcttctcgactgtgggcgtcatcggtgtgaaaggacttgtcat
gttggcccttgtgatccttgtcaggtaccagtaaatgccacttgtttctgcaagaaaaaa
gcggagactgttatttgcggagagatgaacgtgaagggagagttgaaagcagacgatggt
gtgtattcatgcaattttaactgtgggaagcctcttggatgtggtaatcatttctgctcc
gaggtttgtcatcctggaccttgcggggactgtgagttactgcccagtagagttaagacg
tgctattgtggaaaaacgcgtctagaagagcagagcaggagtcgttgcttggacccgatt
ccttcttgttcaaacacgtgcaggaaggttcttccgtgtgggttacatacttgcaacgaa
gtttgccattcgggtgattgccctccttgtttagtcaaagtcaaccagaaatgccggtgt
gggtcatcattcaggaccgtggaatgctacttcacaacctcttcggagacggagaagttt
gtgtgcgctaagtcatgcgggcgtaagaaaaactgtgggaggcatagatgtagcgagcgt
tgctgccctctcttgaacgcgaagaaaaatgatctatctggtgattgggacccacacgcc
tgtcagttaccatgtgggaagaacctaaggtgcggacagcattcttgtgaatcgtcatgt
cacagtggccattgtcctccttgcctcgaaatgatattcactgatcttacatgtgcttgt
ggaagaacttcgattcctccaccactaccttgtgggacacctgttccgagctgccagctt
ccatgctcgattcctcagccttgtggccattctgctacgcatggatgccattttggagat
tgccctccttgttctgcccccgtggaaaagaaatgtgttggtggtcacgtggttctcaga
aacataccttgtgggttgaaagacattagatgtaacaagatctgtggcaagacgagacgt
tgtggcttgcatgcttgtgccagaacctgtcacccagagccttgtgacggttacaatgaa
tctgaagcagtttcgcgtgttacatgtggacagacgtgtggtgctcctagaagagattgc
aggcacgtttgtgcagcactatgccatccttctttgccttgccctgactcgagatgtgag
tttccagttacaattacatgttcttgtggtcgcttaactgccacagtcccttgtgatgct
ggaggagaaagcgccggcaatcttcgtgttggttctgtcaatgaaacctctgttttgaat
aagcttccaacgccatttcagcctgttgagtcgagcgataaccgaatccctctcgggcag
agaaagctttcgtgtgatgatgagtgtgctaagcaggagcgtaagagggttcttcaggat
gcgtttgacatcacaactccaaatcttgactcattacatttcagcgagaactctgctatg
acagagataatttcagacatctataggcgtgatccgaagtgggtactggctgttgaagag
cgcttcaagttcctggtacttgggaaagccagaggaagcacaagtgccctcaaggtccat
gtcttctgcccaatgcaaaaggataaactagacacggttcggcttctagctgagaggtgg
aaacttgcggttagcaacggagggtgggagccaaaaaagtttatagttgttcacgttaca
caaaagtcgaaacctccaacacggatcattggagctaggggtggtgctatctcagtaggc
gggcctcacccaccgtcctttgatccgctggtggatatggatcctaggcttgtggtttct
ttattggatctcccgagggaggcgaatgtcagcgcggtggtactgagatttgggggtgag
tgtgagcttgtttggctgaatgacaagaacgctttggccgtgttccacgaccctgctcga
gccgccactgccatgaggaggctggaccacggttctgtatacaatggagccgtggttgtc
cagaacgccgcccaatctcagtcactcggtaataatgcatggggaaaactacccagcagc
tcatcgtgggatgtgcagaaagcaaatccatggaagaaagcagtgattcaggagagtgat
gactcatggggagctgatgattcccccattggaggatcatctacagatactcaagcctat
gcgtggcgatcagcaacgagcaacgctccaatcgtcacctcagctaaccgttggagtgta
ttggagccagagaagcccaaaacttccgctttggagccattggttcagtcaggagagagc
agcagctcagaagctaccggtaaaaagctggtggaaggctctggggaagaagtggtagat
gattgggagaaggtatgcgagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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