KEGG   Brassica napus (rape): 106420333
Entry
106420333         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106420333
  09124 Replication and repair
   03420 Nucleotide excision repair
    106420333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106420333
   03019 Messenger RNA biogenesis [BR:bna03019]
    106420333
   03400 DNA repair and recombination proteins [BR:bna03400]
    106420333
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106420333
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106420333
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106420333
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 106420333
NCBI-ProteinID: XP_013716643
Position
A10:complement(12024786..12026529)
AA seq 177 aa
MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGNGLVR
NGTAFVTFPVKYQCVVFRPFKGQIFEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ
AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVINDPAAAA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtattggagcgaaacatgcaattacacccacgtttctttggtcgc
aaccttcgtgaaaacctcgtctctaagctcatgaaagacgtcgagggcacttgcagtggg
aggcatgggtttgtagtggcgatcactggaatagagagcgtaggcaatggattggtccgt
aatgggactgctttcgtcaccttccccgttaaataccagtgcgtcgttttcagacctttc
aaaggccagatcttcgaagccgttgtaactctcgtcaataagatgggattcttcgctgaa
gctgggcctgttcagatatttgtgtccaagcacttgataccagatgatatggagtttcag
gctggagacatgcctaattatacaacatctgatggatcagttaaaatccagaaagaatgt
gaagtgagactaaagattattggcaccagagtcgatgccactgaaatcttctgtgtggga
accatcaaagacgattttttgggagtcataaacgatcctgcagcagccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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