KEGG   Brassica napus (rape): 106423563
Entry
106423563         CDS       T04128                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
bna  Brassica napus (rape)
Pathway
bna03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106423563
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106423563
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106423563
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     106423563
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     106423563
Protein phosphatases and associated proteins [BR:bna01009]
 HAD phosphatases
  Other HAD phosphatases
   106423563
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106423563
SSDB
Motif
Pfam: zf-PARP PNK3P Hydrolase_6
Other DBs
NCBI-GeneID: 106423563
NCBI-ProteinID: XP_013719788
Position
A5:complement(23757921..23762425)
AA seq 701 aa
MQVLILQVNYNSTVFFHFRMAGKCELSPNFLEISPNGHMVLTSFVFHHSHSSSLSIIHSS
NLFFPRTRRKVSLPSKKMPIVAEYAKSNRSSCKACSKAIASKTLRVGMISKGPGGFDMTR
WHHLECFPTDSVAIDSVDDVKGLSALEKDDQDALAKLVEQCGERAKEQVDEKEEEIKDPG
SDEISGEKVKEAKGSSASASVIAEYAKSSRSSCKKCSQTIAARELRLGMVTRDSRGFDMT
KWHHLGCFPVESVAVDSVEEIGGFSSLQSDDQDALKEFVLQCGKKTSVDKMEEVNDESVA
DKGQAEETNKRKHSQVEEEVEIKKAGSDEKSGQKVKETKGSSASSKVIAEYAKSSRSSCK
KCSQPIAAKELRLGMVTRDSRGFDMTKWHHLGCFPVESVAVDSVEHIGGFSSLQNGDQDA
LKELVQQCVNKTLKMDEDNDETGTDHHQTEETNKRKHSQVGEIVVEDELQTNANQPGTRK
PKMNTSESTSQVVAEAEISFSASDVKEKYRDASLLPKWKAFETVIFLERDDGLNDSEKIA
AFDFDGCLANTSVKKVGADAWSLMYPSIPEKLQSLYSQGYKLVIFTNESNIDRWKNKRQA
AVDSKIGRLNSFIKRVEVPIQVFIACGVASSGGKDDLYRKPKPGMWQLMKKHFNSGIEID
MDKSFYVGDAAGRKGDHSDADIKFAQANGLKFFTPEEYFIA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgcaagtccttatactccaggtcaattacaattccacagtcttcttccacttcagaatg
gcgggaaaatgtgaactgagccctaattttctcgaaatctcccccaatggccatatggtt
ttaacttccttcgtctttcatcactctcactcttcctctctttcgattatccactcttcc
aatctcttttttccgagaacgaggaggaaagtgtctctaccatcaaagaagatgccgatc
gtagcggagtacgcgaagtcgaaccggtcttcgtgcaaggcgtgttcgaaggcgatcgcg
tcgaaaaccttaagggtggggatgattagcaagggacctggcggattcgacatgaccagg
tggcaccatctggagtgtttccctaccgattcggtggcgattgattccgttgatgatgtc
aaaggcttatccgctttagagaaagatgatcaggatgctttggcgaaactggtggaacag
tgtggtgagcgtgctaaagaacaggtcgatgagaaggaagaagagattaaagatcctgga
tcagatgaaataagtggggagaaggttaaggaggcgaaaggttcttctgcttctgcgagc
gttattgctgagtatgctaaatcaagcagatcgtcatgcaagaagtgctctcagacgatt
gctgctagagaactgaggttggggatggtgactagagactcccggggatttgatatgact
aaatggcatcacttgggatgtttccctgttgaatcagttgcagttgattctgtagaggag
attggtggattttcatcactgcagagcgatgaccaggatgcactaaaggagtttgtgcta
caatgcgggaagaagacctcggtagataagatggaagaagttaacgatgaatctgtagct
gataaagggcaagcggaggagacaaacaaaagaaaacattctcaggttgaggaagaggta
gagattaaaaaggccggatcagatgaaaaaagtgggcagaaagttaaggagacgaaaggt
tcctctgcatcttcaaaagttattgctgagtacgccaaatcaagcagatcatcatgcaag
aagtgctctcagccgattgctgctaaagaactgagattagggatggtgaccagagactct
cggggatttgatatgactaaatggcatcacttgggatgtttccccgttgaatcagttgca
gttgattccgtagagcacattggtggattttcatcgctgcagaatggagatcaagatgca
ttaaaggaactggtccaacaatgcgtgaacaagaccttgaagatggacgaagataatgat
gagactggaactgatcaccaccaaacagaggagacaaacaaaagaaaacactctcaggtt
ggagagatagtggttgaagatgaactacaaaccaatgcgaaccaaccgggtactagaaaa
cctaagatgaacaccagtgagtcaacttctcaggtcgtagctgaagcagaaatctccttt
tcagcttctgatgtgaaggaaaagtacagggatgccagtctattacccaagtggaaagcg
tttgagactgtaatattccttgagcgggatgatggtcttaatgattcagagaagatagct
gcatttgattttgatggatgccttgcaaacacatctgtgaaaaaagtaggtgcagatgca
tggtcacttatgtatccttccattcctgagaaactgcaaagtctttatagtcaaggctat
aagctggtgattttcacaaatgagtctaacattgaccggtggaaaaacaaaagacaagct
gctgtggactcgaaaattggacgcctcaacagttttatcaaacgcgtggaggtccccatt
caggtgtttatagcctgcggagtcgcaagttctggtggtaaagatgacctttaccgcaaa
cccaagcctggaatgtggcaactcatgaagaagcactttaactctggaattgaaattgat
atggataaatcgttctatgttggggatgcagccggaagaaaaggcgatcacagcgacgca
gacattaaatttgcgcaggcgaatggattgaagttttttactccggaggagtactttatc
gcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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