KEGG   Brassica napus (rape): 106425317
Entry
106425317         CDS       T04128                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bna  Brassica napus (rape)
Pathway
bna03060  Protein export
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    106425317
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bna02044]
    106425317
Enzymes [BR:bna01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     106425317
Secretion system [BR:bna02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   106425317
  Eukaryotic Sec-SRP protein
   106425317
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 APS_kinase CbiA AAA_16 ParA nSTAND3 ArsA_ATPase AAA_30 AAA_18 cobW AAA_33 AAA_31 NTPase_1 AAA_17 MeaB ResIII AAA 6PF2K KAP_NTPase AAA_25 KTI12 DnaB_C ATPase IstB_IS21 AAA_14 NACHT CBP_BcsQ Thymidylate_kin PIF1 AAA_24 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 106425317
NCBI-ProteinID: XP_013721504
Position
C2:274047..277207
AA seq 564 aa
MESLQFSSRFSVNRVQCTQNRTTSRTSRAVCRSAFTGTTNSASLSSKSTSTREIWSWVKS
KTIGHGRYRRSQVRAEMFGQLSSGLEAAWTKLKGEDVMTKENIAEPMKDIRRALLEADVS
LPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVIL
LAGLQGVGKTTVAAKLAYNLKKQGKSCMLIAGDVYRPAAIDQLVILGEKIGVPVYTAGTE
AKPADIAKQGLKEAKMNNVDVVIMDTAGRLQVDKEMMDELKDVKRFLNPTETLLVVDAMT
GQEAASLVSAFSVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF
YPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSEKFDFNDLLKQTRAVAKIGS
VSRVLGMIPGMGKVSPAQIREAEKSLVIMEAMIEAMTPEEKEKPELLAESPERRKRIAKD
SGKTEQQVSQLVAQIFQMRVKMKNLMGAMEGGANPAFTDLADAMKAEQKGLPGTARRKKK
AESRKKFVESASSKPGPRGFGSGN
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggagtctcttcaattttcgagccgtttctcggttaatagagttcagtgtactcagaac
cggacgacgagtcgaacaagtagggctgtgtgtcgttctgcgttcactggaaccaccaat
tcagcttctctctcttctaagagtacctccacgagagagatatggagttgggtgaaatcg
aagacaattggccatggaagatacaggaggagccaagtgagggcggagatgtttggtcaa
ttgagtagtggactcgaggctgcttggaccaaactcaaaggagaagatgtcatgacgaag
gagaatattgctgagccaatgaaggacatcagaagagctctccttgaagcagatgtgagc
ctccctgttgttagacggtttgttcaatcagtaagtgaccaagccgttgggatgggtgtc
attcgaggagtcaaaccagatcagcagttggtcaagattgtacatgatgagctagtgaag
ttgatgggcggagaagtatctgagctccagtttgctaagtcaggtcctacagtaatactg
cttgctggtctccaaggagttgggaagacaactgttgccgctaaactcgcttataactta
aagaagcagggaaaatcttgcatgcttattgctggagatgtgtacagacctgctgccatt
gatcaacttgtcattttaggtgaaaagattggtgtgccggtgtatacagcagggactgaa
gcaaaacctgcagatatagctaagcaaggtctaaaagaagctaaaatgaataatgttgat
gtagtcatcatggatactgcagggaggcttcaggtagataaagagatgatggatgagtta
aaagatgtgaagaggtttctgaaccccacagaaacgttgctagttgttgatgccatgact
ggacaagaagctgcatcattggtgagtgcgttcagtgttgagataggaatcacaggagct
atattgacaaagctagacggtgattcaagaggtggtgctgctttgagtgtcaaggaggta
tctgggaaaccaataaaactggtgggacgtggagagcgtatggaggatcttgagcccttt
tatcccaatagaatggctgggaggattctaggaatgggagatgtgctttcgtttgttgag
aaggcacaagaagttatgcgtcaagaagatgctgaggatctgcagaagaaaataatgagt
gagaagttcgacttcaacgatttgctgaagcagactcgtgctgttgccaagataggttcg
gtgtcacgtgttcttgggatgattcctgggatggggaaagtgagtcctgctcagatacgt
gaagctgagaagagtcttgttatcatggaagcaatgattgaagccatgactcctgaggaa
aaggagaagccagagttactagcagagtctccagagaggagaaaaagaatagctaaagat
tcaggaaagacagaacaacaggtgagccaacttgtagcgcaaatatttcaaatgagagtg
aagatgaagaacttgatgggagcaatggaaggaggagcgaatcctgcgttcactgatctc
gctgacgcaatgaaagctgaacaaaagggtctacctggaaccgcaaggaggaagaagaag
gcggaatcaagaaagaagtttgtggagtctgcatcaagcaagcctggtcctcgtggcttt
ggctctggcaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (35)   
   Pfam (35)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system