KEGG   Brassica napus (rape): 106425718
Entry
106425718         CDS       T04128                                 
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
  KO
K03267  peptide chain release factor subunit 3
Organism
bna  Brassica napus (rape)
Pathway
bna03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106425718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106425718
   03012 Translation factors [BR:bna03012]
    106425718
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     106425718
Translation factors [BR:bna03012]
 Eukaryotic type
  Release factors
   106425718
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha GTP_EFTU_D4 WD40_alt
Other DBs
NCBI-GeneID: 106425718
NCBI-ProteinID: XP_022550595
Position
C2:complement(4535270..4539755)
AA seq 575 aa
MVLHISVISLVVPVKSLVCALVIFGISELFYLFTFVNDVDIEAEIRALQLDSAEENNGVG
VVVPAGQNTDGVEILDNKMEEDLKDEVRESTPIPDAQQASEDHEQKMLHPVHNPAKAREK
AAQGKAAKEEAEEVAEANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKE
AKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISG
ASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVNWSKE
RYDEIEQNMVPFLKTSGYNKKKDVIFLPISGLMGVNIDKNMDRDVCPWFSGPSFFEVLNA
IEVPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSIREGDSLIVMPNKEHVKVVAIYCDE
DKVKRAGQGENLRVRITGIEDEDILAGFVLSSTVKPVPAVTEFVAQLQIIELPDNAIFTA
GYKAILHIHAVVEECEIIELISQIDMKTRKPMKKKKIMYVKKNGAVVVCRIQVSNSICVE
KFSDFLQLGRFTLRTEGKTIAVGKVTALSGASSSA
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggttctccatattagtgttattagtctcgtcgttccagttaaatcattagtatgtgct
ttggtaatatttgggatttctgagttattctatctttttacttttgtcaacgatgtagat
attgaggctgaaatccgcgcattacagcttgattccgcagaagaaaacaatggagttgga
gttgtcgttccggcaggtcagaacacagatggagttgagatattggataataaaatggaa
gaagacctgaaagatgaggttcgagaatcaacaccaatccctgatgcgcaacaagcttct
gaggatcatgaacagaaaatgctccatccagtgcataacccagcgaaagccagagagaag
gcagcccaaggaaaggctgccaaagaggaagcggaagaagttgcagaggcaaacaaaaag
agacacttaaatgtggtgttcattggacatgttgatgctggaaagtctactatcggagga
caaattctcttccttagcggtcaggtggacgaccgacaaatccaaaagtatgaaaaggaa
gcaaaagaaaaaagtagagaaagctggtatatggcatatataatggatacaaatgaagaa
gagagggccaagggtaaaacagttgaagttggaagggctcattttgaaactgagaccacc
agatttacaattctggatgccccgggccacaagagttatgtaccaaatatgattagtgga
gcatctcaagcggacattggtgtactggtgatatccgctcgtaaaggtgaatttgaaaca
ggatatgagaggggtgggcagacacgtgagcatgttcaacttgcaaaaacattgggagtg
tcaaagctagtggttgttgtgaacaagatggatgatccaactgttaactggtcgaaagag
agatacgatgaaatagaacaaaacatggtaccgtttcttaaaacctctggctacaacaaa
aagaaagatgttatcttcctgcctatatctggtttaatgggggttaatatagacaagaat
atggatcgagacgtttgtccttggtttagtggccctagcttttttgaagtcctcaatgct
attgaagttccgccacgggatcctaatggtccattcaggatgcccattattgataaattc
aaagacatgggaactgttgttatgggaaaggtagaatctggcagcatccgggagggtgat
tccttgattgttatgccaaataaggaacacgtgaaagttgttgctatatattgcgatgaa
gataaagttaagcgcgctggacagggtgagaatttgagagtccgtataactggcattgaa
gacgaggatatccttgcaggttttgttttatccagcacggtaaagcctgtacctgccgtt
actgagttcgttgcccaactacaaatcattgagctgcctgacaatgcgatttttacagct
ggttacaaggctattcttcacattcatgcagttgttgaggaatgtgagataattgaattg
ataagccaaattgacatgaagacgaggaaacccatgaaaaaaaaaaaaattatgtatgtg
aagaagaatggtgctgttgtcgtctgccgtatacaggttagcaattcaatctgtgttgaa
aaattctcagattttctgcagcttggaagattcactctacgaactgaagggaaaacaatt
gctgttggaaaagtgactgcgctctcaggtgcttcctcaagcgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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