KEGG   Brassica napus (rape): 106425731
Entry
106425731         CDS       T04128                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
bna  Brassica napus (rape)
Pathway
bna00900  Terpenoid backbone biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Module
bna_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106425731
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bna01006]
    106425731
Enzymes [BR:bna01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     106425731
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     106425731
    2.5.1.29  geranylgeranyl diphosphate synthase
     106425731
Prenyltransferases [BR:bna01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   106425731
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 106425731
NCBI-ProteinID: XP_013722211
Position
A1:complement(1110913..1112480)
AA seq 363 aa
MASSVTLGSCPWVLHHQSKTPRSRSPPFITLKPITLTPKRTVSSSSHTVSSSLVTKEDNN
LKSTSSFDFMSYILRKADSVNRALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAAC
ELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDA
LLSFAFEHLASATSSDVSPARVVRAVGELAKAIGTEGLVAGQVADISSEGLDLNDVGLEH
LEFIHLHKTAALLEASAVLGGIVGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQE
LGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAN
RQN
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcttcttcagtgactctaggttcatgcccatgggttcttcaccaccaatccaaaaca
cccagatccagatctcctcccttcatcacacttaaacccatcaccctcaccccaaaacgc
accgtttcgtcttcttcccacacagtctcctcttccctcgtcaccaaagaagacaacaac
ctaaaatccacctcctccttcgacttcatgtcttacatcctccgcaaagccgactccgtc
aacagagccctggactccgccgtccccctccgggagccgctcaagatccacgaggcgatg
cgctactccctcctcgccggcggcaaacgcgtcaggcccgtcctctgcatcgccgcctgc
gagctcgtcggcggggaagagtccctcgccatgccggcggcctgcgccgtcgagatgatc
cacaccatgtcgctgatccacgacgacttgccgtgcatggacaacgacgacctccgccgc
gggaagccgacgaaccacaaggtttacggcgaggacgtggcggttctagccggagacgcg
cttctctccttcgccttcgagcatttagcgtcggcgacgagctccgacgtttctccggcg
agggtggtcagagccgtcggagagttggcgaaagctataggcaccgaagggctcgtggcg
ggacaagtggcggatataagcagcgaagggttggacttaaacgacgtcggattggaacat
ctagagtttattcatttgcataaaacggcggcgttgcttgaagcctcagccgttttgggt
gggatcgtcggtggagggagtgatgaagagatcgagaggctgaggaagttcgcgaggtgt
atcggtctgttgtttcaggtggttgatgacatcttggacgtgacgaagtcgtctcaggag
ctggggaagaccgccgggaaagatttgatcgccgataagctgacgtatccgaagctcatg
gggttggagaaatcgagagagttcgctgagaagttgaatagagaggcgcgtgatcagctt
ttggggtttgattccgacaaggttgctcctttgttggctttggctaattacattgccaat
agacagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system