KEGG   Brassica napus (rape): 106427161
Entry
106427161         CDS       T04128                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bna  Brassica napus (rape)
Pathway
bna03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106427161
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106427161
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106427161
   03036 Chromosome and associated proteins [BR:bna03036]
    106427161
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     106427161
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     106427161
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     106427161
SSDB
Motif
Pfam: WD40 ComGF DUF4213
Other DBs
NCBI-GeneID: 106427161
NCBI-ProteinID: XP_013723349
Position
C5:9951552..9956177
AA seq 502 aa
MNGGDDAASSAAASGPPPSLEWRFSQVFGERTAGEEVHEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDTKDNGGSRRDAEQMDYTVRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQPANGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSKDPGSSSPLPLIANGVH
ADKPQDYLSKDFPFPPGGIPSLRLPLVVTSQETNLVARCRRVYAHAHDYHINSISNSSDG
ETFISADDLRVNLWNLEVSNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKG
SIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKNGRYILSRDYMTLK
LWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGSRVATGSYSNLFRVF
GASQGSTEAATLEASKNPMRRQTPARSSRSMTSVVRRGSESPGSDANGNAHDFTTKLLHM
AWHPTENSIACAAANSLYMYYG
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaacggtggtgacgatgctgcttcctccgccgctgctagtggtcctcctccgtctcta
gagtggagattctctcaggtcttcggcgagcgaaccgccggagaagaagtccatgaagtt
gacatcatttcagccattgagtttgataaaagtggagaccatctcgcaactggtgaccgt
gggggccgagtagttctttttgagaggacggatactaaagataatggtggatccaggagg
gatgctgagcagatggattacacagttaggcatcctgagtttcgatacaaaacagagttt
cagagtcatgaacctgagtttgactatctcaagagtttggaaatagaggagaaaatcaac
aaaatcagatggtgtcagccagcaaatggtgcattgtttctgctttccacaaatgataaa
accatcaaatattggaaggtacaagagaagaagatcaagaaaatttctgaaatgaatatt
gatccgtccaaagatccaggttcaagtagccctcttccattaattgctaatggagtacat
gccgataaaccacaagactacctgagcaaggactttcccttcccgccaggaggcattcca
tctctgcgtttgcctttggtagtgactagccaggagacaaaccttgtggctagatgccga
agagtgtatgcgcatgctcacgattaccatattaattcaatctcaaatagcagcgatgga
gaaacctttatttcggctgatgatctgcgagtcaatctctggaatttggaagtcagcaac
cagagtttcaatattgttgatgttaagcccacaaacatggaggacttaactgaggttatt
acatcagctgagttccacccaatccattgtaatatgctcgcatatagcagttcaaaaggc
tccatccgtttgattgatatgaggcaatcagctctgtgcgattctcatactaaattgttt
gaagaaccggaagcacctggttcaagatcatttttcacagagataattgcctcaatttca
gatattaaattctcaaagaatgggagatacatacttagtcgcgattacatgaccctcaag
ctgtgggacataaacatggattctggtccagttgcgtcttaccaggttcatgaacatctg
agaccaaggctatgtgatctctatgaaaatgactccatctttgataaattcgagtgttgt
ctgagtggtgatggatcgagggtagcaacaggctcttacagcaatctgttccgcgtattt
ggagcgtctcaaggaagtactgaagctgcaacgttggaagctagcaaaaacccgatgagg
aggcaaacacctgcgagatcttccagatctatgacaagcgtggttagacgaggatcagag
agtccaggatcagatgcgaacggaaacgcacacgatttcacaactaagttgctgcatatg
gcttggcacccaacggagaactcaattgcttgtgcagcagccaacagcttgtacatgtat
tatggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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