KEGG   Brassica napus (rape): 106428963
Entry
106428963         CDS       T04128                                 
Name
(RefSeq) THO complex subunit 4B
  KO
K12881  THO complex subunit 4
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106428963
  09122 Translation
   03013 Nucleocytoplasmic transport
    106428963
   03015 mRNA surveillance pathway
    106428963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106428963
   03041 Spliceosome [BR:bna03041]
    106428963
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106428963
    TREX complex
     106428963
Spliceosome [BR:bna03041]
 Complex C
  Other components
   EJC/TREX
    106428963
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106428963
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 106428963
NCBI-ProteinID: XP_013725162
UniProt: A0A078J0Z5
Position
A3:complement(314353..316039)
AA seq 292 aa
MAGGLDMSLDDLIKSNRKPTGSRGRGNGGASSGGRGFGGGSSGPSRRFANRVGNRTAPYS
RPIQQQAHDAMWANDVFATDASVAAAFGHQSAGVGVGGSSIETGTKLYISNLDYGVSNED
IKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNDVQLDGKLMKIEIV
GTNLSAPAPPMLAPVQIPFPSNGLLGNFNENYNGNFNGNYNGNFRGRGRGGFMGRPRGGF
GGGNFRGGRGARGGGGGGGRGSGRGGRDEKVSAEDLDAELDKYHKEAMEETS
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcaggtggtttggatatgtcactcgatgacctcatcaaatccaatcgaaaacctacc
ggatctcgcggccgaggaaacggcggtgctagcagcggcggtcgcggattcggcggtggc
tcctccggtccgtctcgacggtttgctaaccgcgtgggaaacagaacggcgccgtattca
aggccgattcaacaacaagctcatgacgcgatgtgggctaacgacgtcttcgccactgat
gcgagtgtggcggctgcttttgggcatcagtctgcaggtgttggcgttggtggttcttca
atcgagactggaacgaagctctacatctccaacttggactatggtgtctccaacgaggat
atcaaggagctcttctcagaggttggtgaccttaagcgttacgggattcactatgatagg
agtggaagatccaagggtactgctgaggttgttttttcacggcgtggtgatgccttggca
gctgtcaagcgttacaatgatgttcagttggatggaaagctgatgaagattgagattgtt
ggaacgaatctttcagctccagcacctcctatgcttgctcctgttcaaattccatttcct
tcgaatgggttacttgggaactttaatgagaactacaatggaaacttcaatgggaactac
aatggaaactttagagggagaggaagaggtggttttatgggacggcctcgtggtggtttt
ggaggtggtaatttccgtggtggtaggggagctagaggaggaggaggaggtggtggtcgt
ggcagtggaagaggaggacgtgatgaaaaggtgtctgcagaggatcttgatgctgaattg
gacaagtatcacaaagaggcaatggaggaaacaagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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