KEGG   Brassica napus (rape): 106436241
Entry
106436241         CDS       T04128                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106436241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106436241
   03400 DNA repair and recombination proteins [BR:bna03400]
    106436241
Spliceosome [BR:bna03041]
 Complex B
  Other components
   Prp19 complex
    106436241
 Complex C
   Prp19-CDC5 complex
    106436241
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    106436241
SSDB
Motif
Pfam: BCAS2 DUF6447 Milton FUSC
Other DBs
NCBI-GeneID: 106436241
NCBI-ProteinID: XP_013732654
UniProt: A0A078GGD0
Position
C5:complement(45745481..45747400)
AA seq 253 aa
MATNNGEVLMLEAAPEATKPWASAANAEVIDALPYIDDDYGNPLIKAEVDRLVEEEMRRS
SKKPADFLKDLPPLPKFDFENCPVLGKEYERVRAGKPPVRIDFESRYKHELPPASKKNDD
AAWKQYLHKTQRSLQQKMIELENLEMMSKQGPEIWRQNNHRLEVFLTRMQRLAQEQNEEI
EKVNRERKYHQQTTAYELNALSQEWRQLCVKNMEIQSACAVLETQIDSLKREASERGWNL
EEKLESVKPLQSQ
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgacgaacaatggagaggttttgatgctggaggcggcgccagaggctacgaaaccg
tgggcgagcgcggcgaacgcagaagttatcgatgcgcttccttatatagacgatgactac
ggcaatccactgattaaggctgaggtggaccgcttggtggaggaagagatgcgtcggagc
tctaagaagcctgctgacttcctcaaggatcttcctcctcttcccaagttcgatttcgag
aactgtccagtcctcggcaaagagtatgagcgtgttcgagctgggaagccacctgtacgg
atcgattttgagtcccgttacaagcatgaattgccgcctgctagcaagaaaaatgatgat
gctgcatggaagcagtatcttcacaagactcaacgttcattgcaacagaagatgatcgag
cttgagaacttggaaatgatgtcaaaacaagggcccgagatttggagacagaacaatcat
cggctagaagtattcttgaccagaatgcaaagactagctcaggagcagaacgaggagatt
gaaaaagttaatcgtgagaggaagtaccatcagcaaaccacagcgtacgagctaaacgct
ttatctcaagaatggagacagctctgtgtcaagaacatggagattcagtctgcgtgtgct
gtgcttgagacacaaatcgattcgttgaaaagggaagcttctgaaaggggatggaactta
gaagagaaacttgaaagtgtcaaaccgcttcaatcgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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