KEGG   Brassica napus (rape): 106438895
Entry
106438895         CDS       T04128                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106438895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106438895
   03009 Ribosome biogenesis [BR:bna03009]
    106438895
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106438895
Spliceosome [BR:bna03041]
 Complex A
  U1 snRNP components
   U1 related factors
    106438895
 Complex B
    106438895
Ribosome biogenesis [BR:bna03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    106438895
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 106438895
NCBI-ProteinID: XP_013735638
Position
A3:14936367..14940144
AA seq 636 aa
MAATAPSAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPQPPSNLPVSSSA
SVQVPQASAVPNGSSYAPAKGGDDKYSRATGDGGPRRSRFSEINDRSGAPYLNGAANGLV
NSLPPSSAPVSDISPEAYCRRHEITVSGGQVPAPLMSFETTGFPPELLREVLNAGFSAPT
PIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLLPGFMHLQRVRNDSRMGPTILVLSPTREL
ATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL
RQVSYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ
VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN
LTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVINYDFPNG
VEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGADQRVPPQIREMAARGGGG
MNKFSRWGPSSGGRGGSSGYGGRGGGSGYGGRGSDSGYGGRGGFGSRDSGMGSRSSNGWG
RERERSRSPERFNRVPPPSSTGSPPRSFHEAMMKHR
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggctgcaaccgctccttccgcagtccgttatgctcccgaggatcattctcttcccaag
ccgtggaagggacttgttgatgatcgaactggatacttgtacttttggaatcccgagacc
aacgttactcaatacgagcgacctcaacctccttccaacttacctgtaagctcctccgcc
tccgttcaggttcctcaagcctctgccgtaccaaatggtagtagctatgctcctgccaag
ggtggtgatgataagtactctagagccaccggtgacggtgggcctaggcgctcgaggttt
agtgagattaatgacaggagtggagcgccgtatttgaatggggctgccaatggacttgtg
aactctcttcctccttcatcagctccagttagtgatatttctccggaggcctattgccgc
cgtcatgaaattaccgtcagtgggggccaagtaccagcacctctaatgtcctttgaaact
actggttttcctcctgagcttctgcgcgaggtactcaatgcaggtttctctgctccaact
ccaattcaagctcagtcgtggccaattgcgatgcaaggtagggacatagttgccattgct
aaaactggctcgggaaaaactttgggttacttacttcctggatttatgcatcttcaacgc
gtccggaatgattcgcgaatggggccaacaatcttggtactgtctccaaccagggagctt
gccacacaaatccaagacgaggctgttaaatttgggaggtcgtcaagaatttcatgcaca
tgcttgtatggtggtgcaccgaagggtccccagctgagggatttggaaagaggagctgat
atcgtggtggcaactcctggacgattgaatgacatccttgagatgaggagaattagtctg
cgtcaagtatcttatcttgtgctagatgaggcagatagaatgttggacatgggtttcgaa
ccgcaaataaggaagattgtgaaagagattcctactaagcgccaaacacttatgtacaca
gctacatggccaaagggagtcaggaagattgcagcggacttgcttgttaaccctgctcag
gtcaacattggtaacgtcgacgagcttgtggctaacaagtcgatcacacagcacattgaa
gtggtagcaccaatggagaaacagaggaggttagagcagatattgaggtctcaggaacca
ggctcgaaggtgataatattctgctcaaccaaaaggatgtgcgaccagctaactcgcaat
ctgacccgccaatttggagctgctgccatacatggagacaagtcacagcctgagagagac
aatgttctgaatcaattccgcagtggcaggactccggttcttgttgcaactgatgttgct
gctcgtgggctggacgttaaggacatcagggcggtcataaactatgatttccccaacgga
gtggaagactatgtgcatagaatcggaagaacaggtagagctggagcgactggtcaggca
ttcacgttcttcggcgatcaagactcgaaacatgcttcggatctgatcaagatcttggaa
ggagcagaccagcgagttcctcctcagatccgcgaaatggctgcacgtggtggcggtgga
atgaacaaattcagccgttggggtccatcttccggaggtcgagggggcagctctggttat
ggtggcagaggtggcggctctggttatggtggcagaggtagcgactctggttatggtggc
agaggtggctttggttcacgtgacagtggaatgggaagtagaagcagcaatggatgggga
agagagcgtgaaaggagtcgtagcccggagagattcaacagagttccacctccgtcttct
actggatctcctcctcgcagcttccatgaagccatgatgaaacaccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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