KEGG   Brassica napus (rape): 106439157
Entry
106439157         CDS       T04128                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106439157
  09122 Translation
   03013 Nucleocytoplasmic transport
    106439157
   03015 mRNA surveillance pathway
    106439157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106439157
   03041 Spliceosome [BR:bna03041]
    106439157
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106439157
Spliceosome [BR:bna03041]
 Complex C
  Other components
   EJC/TREX
    106439157
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 106439157
NCBI-ProteinID: XP_013735997
Position
C1:complement(283275..285888)
AA seq 529 aa
MSSSPFPILDNRPIDKWKVTELKEELKRRRLTTQGLKFDLVRRLDDALRAEQEESANQQP
DVTYVPGGNLAPDPTQTTPVPLVGTTPEPEVNAVVVTQEASNERIVEMENKETFSGLDSK
AQPTEVSAIHNQVSEVIPVTGFEVKSDCISSNNEKIELKGNEIADNVKLEHSLSKSQEPS
TAIGDSHPKISAGGGDDADMTKGNNNSVDSEKLNLDRSSGDESMDDEPETNQNESVTPLE
VVDKSEQNDLLPDKADNMDGEKGEAPDNKSHPLVASDKRKLPVNDQEAVGNNVPAKRQRR
WNSGNIKVPEAQATNSVAPSTTPSSAGLKRDFSRSDSSVSEDGPKERVVPPSPKEPTNSL
KIDRFLRPFTLKAVQELLGKTGNVTSFWMDTIKTHCYVSYGSVEEAAATREAVYNLQWPP
NGGRLLTAEFVGPEEVKAKLEAPPPQQPKDQAPSQPPPTALPPPPPLAKAPPVKERHALP
PPPPLVPEEQEAPIVTLDDLFKKTKAIPRIYYLPLSEEQVAAKLAANNK
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgtcgtcatcaccttttccaatcctggacaaccgcccaatcgacaagtggaaggttacc
gagttgaaggaagagctcaaaagacggagactaactacacaaggcttgaagtttgatttg
gttaggcgtctcgatgatgcccttcgtgctgagcaggaagagtcagccaatcagcagcct
gatgttacttatgtacctggaggcaaccttgcaccagatccaacgcagaccactcctgtt
cctctagttgggaccactccagaaccagaggttaacgctgtagtagttacccaagaggca
tctaatgagcggattgttgagatggagaataaggagacgtttagcgggttggattctaag
gcccaacctacagaggtatctgctatccacaaccaggtatctgaggtcatccccgttaca
gggtttgaggtaaaatctgattgtatttcatcaaataatgaaaaaatagaactaaagggt
aacgaaattgctgataatgtcaaattagaacatagtcttagtaagtcccaagagccatca
acagccattggcgattcgcatccaaagatatctgccgggggtggagatgatgcagatatg
accaaaggaaataataatagtgtcgactctgaaaagttgaatttagatagaagttctggt
gatgagtctatggatgatgagcctgagacgaaccaaaatgaatcggttacgcctcttgaa
gtggtggataagagtgagcaaaatgacttgcttcctgataaggctgataatatggatggt
gagaaaggagaagcccctgataacaaaagccatccactggtggcttctgacaaaagaaag
cttcctgttaatgatcaagaagctgttggaaacaatgtgcctgcaaagaggcaacgccga
tggaactccgggaatattaaagttcctgaagcacaggccactaatagcgtggcaccctct
acaacaccgagctcagctggtctgaagcgtgacttctcccgatctgactcttcggttagt
gaggatggacccaaggaacgcgtggttcctccatctccaaaggagcccaccaattccctc
aagattgatcgtttccttaggccgttcacactgaaagctgttcaagagcttttgggtaaa
actggaaatgtcactagtttctggatggacaccattaagacccactgctatgtatcatat
ggttcagttgaagaagctgcagcaacaagagaagcagtgtataacctccaatggccacct
aatgggggccgtcttctgacagctgaatttgttggaccagaggaagtgaaggcaaaacta
gaagctcctcctcctcagcagccaaaggatcaggctccttcgcagccacctccaactgct
ctgccaccaccaccgcctttggccaaagcacctccagtcaaagaacgccatgcccttcct
cctcctcctcctctagtcccggaggaacaagaggctcccatagtcactctggatgatctt
ttcaagaagacaaaagcaatccccaggatatactacttgcccttgtcagaggaacaagtt
gcagctaaacttgcagctaataacaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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