KEGG   Brassica napus (rape): 106439757
Entry
106439757         CDS       T04128                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106439757
  09122 Translation
   03013 Nucleocytoplasmic transport
    106439757
   03015 mRNA surveillance pathway
    106439757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106439757
   03041 Spliceosome [BR:bna03041]
    106439757
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     106439757
Spliceosome [BR:bna03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    106439757
SSDB
Motif
Pfam: MIF4G_like MIF4G MIF4G_like_2
Other DBs
NCBI-GeneID: 106439757
NCBI-ProteinID: XP_013736723
Position
A3:complement(20814172..20820122)
AA seq 845 aa
MSNWKTLLLRIGEKGPEYGTSSDFKDHIETCFGVIRREIERSGDQVSPYLLQCAEQLPHK
IPLYGTLIGLLNLENEDFVRKIVESVQANFQVALDSGNCNNIRILLRFMTSLLCSKVIQP
ASLIVVFETLLSSAATTVDEEKGNPSWQAQADFYVICILSSLPWGGAELAEQVPDEIERV
LVGIQAYLSIRKHSSSSGLNFFLKGESENSPSEKDFVEDLWDRTQSLASNGWKLDSVPRP
HLSFEAQLVAGKFHELRPIKCMEPPSPPSDLSRENIGKQKHDALMRYPQRIRRLNIFPAN
KTEDVQPIDRFVVEEYLLDVLLYLNGCRKECASYMANLPVPFRYEYLMAETLFSQILLLP
QPPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSN
FQFIWPWEEWSYVLDLPKWAPKRVFVQEVLQREVRLSYWDKIKQSIENASALEELLPAKA
APAYRYSLEEGKEKTEEHQLSAELNRKVKEKQSARDMMSWIEEKIYPVHGFEVTLTVVVQ
TLLEIGSKSFTHMVTVLERYGQVFGKLCPDNDKQVMLLSQVSAYWKNNAQMTAVAMDRMM
GYRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNVLV
AEKASANARAELEAAESKLSLVEGEPVLGENPGKMKRLKSTVEKTGEAEVSLRESLEAKE
ALLNRALSETEALLLLLFQSFSAVLKERLPEPAKARSMEDLKSEDENSSAMEVDSENGNP
KKKSEIGEREQWCLSTLGYLTAFTRQYANEIWPHMEKLKLEVFSGEDVHPLFLQAIFSAL
QIPLQ
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgagcaattggaagactcttcttctccgaatcggcgagaagggccccgagtacggcact
tcctccgacttcaaagaccatatcgagacttgttttggtgttattcgtagagaaatcgaa
cgttctggggaccaagtttcgccttatctactgcagtgtgctgaacaattgcctcataag
attcccttgtatgggactctgattggtttgttgaacttggagaatgaagactttgtcagg
aagatagtagaaagtgtccaagctaatttccaggtcgctttagattctggaaactgcaac
aatatccgcatattgctacgctttatgacttccctgttgtgcagtaaggttattcaacct
gcctctttgattgtcgtgttcgaaacgctgttgtcatctgctgccaccactgtggatgaa
gagaaaggaaacccatcatggcaagcacaagctgacttttacgttatatgcatcttgtca
agcctcccgtggggaggagcagaactcgcggagcaagttcctgatgagattgaaagagtg
ttagtcgggatacaagcttatttgagcatccgaaagcattcttcatcctctggcttaaac
ttttttctcaaaggagaatctgaaaatagtccttcagaaaaggatttcgtggaagaccta
tgggatcggacacagtctctagcttccaatggatggaaacttgatagtgttcctaggcct
catctctcgtttgaagctcagcttgttgctggaaaatttcatgagctacgccctattaaa
tgtatggaaccaccaagtccaccttctgatctttcgagggaaaacattggcaagcaaaag
catgacgctttgatgagatatcctcagaggattcgcaggttgaatatatttccagctaat
aagactgaggatgtacaacctatcgatcgctttgtcgttgaggagtatttactggatgtg
ctcctctatttaaatggatgccggaaggagtgcgcttcctacatggctaatcttcctgtg
ccctttcggtatgagtatcttatggcagagacactattttctcagatactgctgctacca
cagccaccgttcaagactctctattatacactcgtgattatggatctttgtaaggctctt
ccgggtgcctttcctgctgttgttgctggcgctgttcgggcactctttgagaaaatttcc
gacctagacatggaatctaggactcgccttatcctctggttttctcaccacttatccaac
ttccagttcatctggccatgggaagagtggtcttatgtgttggaccttcccaaatgggcc
cctaagcgtgtatttgttcaggaggttctccaaagagaagtacgcttgtcttactgggat
aaaattaagcagagcatcgagaatgcgagtgccctagaagaattgcttcctgcaaaggct
gctccggcatacaggtactccttggaagagggtaaagagaaaacagaagagcatcagttg
tcagctgaactgaacaggaaggtcaaggaaaaacaatctgcacgtgacatgatgtcgtgg
attgaagaaaagatatatccagttcatggttttgaagtgactcttacagtagtcgtgcag
accttactcgagatcggatcaaaaagtttcactcatatggtcacagtcctagagcggtac
ggccaagtctttgggaaactctgtcctgataatgataaacaggtgatgctattatcgcaa
gtgagtgcatactggaaaaacaatgcacaaatgacggccgtggcaatggataggatgatg
ggttatagactcgtatcgaatcaggcaattgtgagatgggttttctctccggagaatgtt
gatcagtttcatgtgtctgatcagccatgggagatacttgggaatgcacttaacaagact
tataatcgtatctctgatttgaggaaagacatatcaaacattacgaagaatgttttggtt
gctgagaaagcttcagcaaacgcacgagcagagctggaggctgctgagagcaaactttcc
ctagtggagggtgagccagtccttggtgaaaatccagggaagatgaagcgtttgaaatca
acggtggagaagacaggggaggcagaggtgtctctacgggaatccctagaggcaaaagag
gctcttcttaacagagctctctctgaaactgaggctctactgctcctgctgttccagagt
ttctctgcagtcctgaaagaacggcttccagaaccagcgaaagcgagatcgatggaggat
ctaaaatctgaagatgaaaactcatctgcgatggaggtggacagtgaaaatggaaaccca
aagaaaaagtctgagatcggtgagagagaacagtggtgcttatcgacacttggatatctt
acggcatttacaagacaatatgcgaacgagatatggcctcacatggagaagttgaagttg
gaggtgttctctggagaggatgtgcatcctctcttccttcaagccatattctctgcactc
caaatccctttacaataa

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