KEGG   Brassica napus (rape): 106443258
Entry
106443258         CDS       T04128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106443258
  09124 Replication and repair
   03420 Nucleotide excision repair
    106443258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106443258
   03019 Messenger RNA biogenesis [BR:bna03019]
    106443258
   03400 DNA repair and recombination proteins [BR:bna03400]
    106443258
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106443258
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106443258
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106443258
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 106443258
NCBI-ProteinID: XP_013740284
Position
A3:4836366..4838219
AA seq 196 aa
MNVASETEVRGEXKKKRPEMFFHIVLERNMQLHPRFFGQNLRENLVSKLIKDVEGTISGR
HGFVLAVTGIESIGKGLIRDGTPFVTFPVKYRCVVFRPFEGEVLEAVVTRVVQHGFFAEA
LSLKIFVSNHCIPDDMEYQAGDMPTYTKSDGSVRIQEDCEVRLKVFGFSIDATEISCVGS
IKERFLGLITDPGAVA
NT seq 591 nt   +upstreamnt  +downstreamnt
atgaacgtagcctcagagacagaagtgagaggagagncgaaaaaaaagcgaccagagatg
ttcttccacatagttttggagcgcaacatgcaattacatccacgattctttggtcaaaac
cttcgtgaaaacctcgtctctaagctcataaaagatgtcgagggcactatcagtggccga
catgggtttgtattagcggtaactggaatagaaagcataggaaaaggattgatccgagac
gggactcctttcgtcaccttccccgttaagtaccgatgcgttgttttcagacctttcgaa
ggcgaggttctggaagctgttgtcacacgggtcgttcagcacggattcttcgctgaagct
ctctctcttaagatttttgtgtccaatcattgcataccagatgatatggagtatcaggct
ggtgacatgcctacttacacaaaatcagatggatcagttaggatccaggaagactgtgaa
gtgagactaaaggtctttggctttagtatcgatgccacagagatctcctgtgtgggtagc
atcaaagaaagatttttggggctcataaccgatcctggagccgttgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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