KEGG   Brassica napus (rape): 106444892
Entry
106444892         CDS       T04128                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106444892
   04121 Ubiquitin system [BR:bna04121]
    106444892
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106444892
Membrane trafficking [BR:bna04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    106444892
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106444892
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-ANAPC11 zf-RING_10 Mu-like_Com
Other DBs
NCBI-GeneID: 106444892
NCBI-ProteinID: XP_013741768
UniProt: A0A817AXU5
Position
A4:complement(8647000..8648536)
AA seq 332 aa
MSLSVPIRRTDGAPNGAFRTFGLYWCYHCHRTVRIASSNPLEIACPRCLRQFVVEIEMRR
PRVTFTHAAPPLDASPETRLLEALSLMFDPPIIGRFGEDPFLRARSRNVEHEPTTPLPHH
RRRHSLDNDNDGGLPPPRRTYVILRPTDPTSPLGNRIEPAPPRRMNPRDFFTGGSGLEQL
IEQLTQDDRPGPPPAPEPTIDALPTVTITSKHLTNDTSQCTVCMEDFVPGGEATELPCKH
IYHKNCITPWLRLHNSCPICRRDLPPPVNNTVTDSQERSDSTREEVPERRRPRWMQFWNM
GPSRARYQRVSPEETAHRNTRAQLQWRHCNIL
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcattgagtgtgccaataagacggaccgatggtgcacccaatggcgcattcaggact
tttggcctctactggtgctaccactgtcatcgtacggtcaggattgcatcatcaaaccca
ttagagatcgcgtgccctcgatgcttaaggcaattcgttgtggaaatcgagatgagacgg
cctcgggtgactttcactcatgccgctccacctttagatgcttctcctgagacacgcctt
ctcgaagctctgtccctcatgtttgatcctccaatcataggtagattcggtgaagaccca
tttctcagggcaaggtccagaaacgtggaacacgaaccaacaacacccctaccgcaccat
cgtcgacgccacagccttgacaatgataacgatggcggtttacctccaccaagaagaaca
tatgtaatactacggcccactgatccaaccagtccacttggaaacaggattgagccagca
ccacccaggcgtatgaacccacgtgatttctttactggagggtcaggtttagaacagctg
atcgaacagctaacgcaagacgataggcctggaccaccacctgcaccagaacccaccatc
gacgccctaccgacggtaacgatcacatcaaaacatctaaccaacgacacgtcccaatgc
acggtgtgcatggaggacttcgttcctggcggggaagctaccgaactaccatgtaaacat
atttaccataaaaactgtataactccatggctaaggcttcacaattcatgcccaatctgc
cgccgtgatctgcctcctccggtcaacaacaccgttacagattctcaggaaaggagcgat
tctactagagaagaggtacctgaaagaaggcgccctagatggatgcagttctggaacatg
gggccttctagagcaaggtatcagagggttagtccagaagaaacagcgcacaggaatact
cgagctcagttgcagtggcgtcactgtaatatcctatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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