KEGG   Brassica napus (rape): 106445647
Entry
106445647         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106445647
  09124 Replication and repair
   03420 Nucleotide excision repair
    106445647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106445647
   03400 DNA repair and recombination proteins [BR:bna03400]
    106445647
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     106445647
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106445647
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 106445647
NCBI-ProteinID: XP_013742691
UniProt: A0A078HFV5
Position
C7:complement(10509987..10511779)
AA seq 319 aa
MDSGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLD
VTSKDLYSADPTVTPVDFGDSSGADSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTDDEKIDLIESSPTKVFDFDAVTRQVVVVDPEAYTY
DEEVIKKAEAMGKQGLIEIRPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq 960 nt   +upstreamnt  +downstreamnt
atggacagtggtgccacttaccagagattcccaaaggtgaagatccgtgagctgaaagat
gactacgccaagttcgagcttcgtgacaccgatgtctccatggcgaacgctctccgtcgc
gttatgatctcggaggtccccacggtcgcaatcgatctggtcgaaatcgaggttaattcc
tctgttctcaacgatgagttcattgctcatcggttaggtctcatccctctcactagcgag
cgtgcgatgagcatgcgcttctctcgagactgcgatgcttgcgacggagacggacagtgc
gagttttgctctgttgagtttcgtcttagcgctaaatgtgtcactgaccaaaccctagat
gttactagtaaggatctgtacagcgctgatcctactgttactcctgttgatttcggtgat
tcatcgggagctgattcaagcgagcaaaggggaatcatcatagtgaaactgagacgggga
caagaactgaagcttagggcgatagctaggaaaggaatcgggaaagatcacgctaaatgg
tctcctgcagccactgttacgttcatgtatgagcctgacattattatcaatgaagatatg
atggacactttgacagacgacgaaaagattgacttgattgagagcagcccgaccaaagtt
tttgactttgatgctgtcaccagacaggttgtggtggttgatccagaagcatacacttac
gatgaagaagtgatcaagaaagcagaagccatggggaaacaagggctcattgagatccgt
ccgaaagatgacagttttatattcactgttgaatccacaggtgcagtgaaggcttcgcag
ctggtactgaatgccatagatctcctgaagcagaagctcgatgcagtccgtctctcagac
gacactgttgaagctgatgatcagtttggcgaactaggtgcacatatgcgcggaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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