KEGG   Brassica napus (rape): 106448641
Entry
106448641         CDS       T04128                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
bna  Brassica napus (rape)
Pathway
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106448641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106448641
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     106448641
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  HECT type E3
   106448641
SSDB
Motif
Pfam: HECT Arm
Other DBs
NCBI-GeneID: 106448641
NCBI-ProteinID: XP_048607722
Position
C3:456061..462937
AA seq 1502 aa
MENRGQKRMEDVEELPADKRACNSQDSRSSSSGGSSLQSQSQEAANGASSGHETTDADMD
TSSSDSPSSHSDGEPEKEEEDTDYGSCDSDDEEGEDPRHKALQDVQWGRSSEDQQKLSSL
VTRLSEEVDPSLQLTGLTELCEVLSFCTEDSLSTVMADTLARVLVKLANHESNADIMLLA
IRAITYLSDVYPRSVAFLVKHETLPALCQRLQAIEYLDVAEQCLQALEKISKDEPVACLN
AGAIKAVLSYIDFFSTSLQRVAVSTVVNICRKLSSESPSPFMDAVPILCNLLQYEDRQLV
ESVAICLTKITDQVSESPEMLDQLCSHGLIHQSIHLLNLNGRTTLSQPVYNGVIGLLRKL
SSGSTLAFRTLYELNTGYRLKEIISTYDISHSVSSTNPITACSNQVHEVLKLVIELLPSA
PVEDNQLALEKESFLVNQPDLLQQFGADVLPVMIQVLKSGANVYVSYGCLSAIHKLTCLS
KSADFVDLLKNANILSVLAGILSRKDHHVVVVALQIAEVLLGKYSEDFLNSFIKEGVYFA
IEALLNSGQQNQGSADVSEVPVPKETVKCLCQSFERSISSSSQTCKIEKDSVYILATRIK
ESFFGPEVFDSQKGLTDILQNLKHLSAALDDLMTVPIDAHALHDEKFFSVWSQIMERLNG
RESVSTFEFTESGVVKALANYLSNGLHQRKFSKGDPECDSLPFVGNRFEVFTRSLWSDGE
ATSSVLIKKLQNSLSSLENYPIVLSQFLKQRNSFATVPNGRSTSYPIVRVRFVKAEGETC
LRDYSQDLVTVDPLCFWDAVDQYMWPKVQLEPLDSVEEKDQAMECPSSQLQSTSISCQGE
SSTHMEIDSPNASQLQGSQEEDQEQLPDSGEENTSSSEEEDALPEEDALPRLLFRLEGLE
LDRSLTVYQAILLHKLKSASETTNDSKLSGSHTITYERAPQLVESDENLFPPGSMDNDEY
HPFLSFLFAQRLGLRHKATNPPAYDILFLLKSLEGMNRFLFHLICHERINAFGEGRLENL
DDLRVQVRPVPYTEFVSSKLTEKLEQQLRDSFAVSTCGLPPWFNDLMGSCPFLFSFEVKT
KYFRLAAFGSQKVHHHPQHLSSEGRPVTGSLPRKKFLACRENILESASKMMELHGNQKVV
IEVEYSEEVGTGLGPTLEFYTLVSRAFQNPDLGMWRCDRSSFDGKPKEDSGFLVAPSGLF
PRPWSDTAAAFPDVLEKFVLLGTVVAKALHDRRVLDLPFSKAFYKLILGQELSSFDIHFV
DPELCKTLVELQALTRRKKVFSESQTDARAAKCDLSFRGTNIEDLCLEFALPGYTDYVLT
STNDMVNMDNLEEYIKAIVNATVCNGIQKQVEAFRSGFKKVFPLEHLGIFNEEELETLLC
GERDLFNMNEVLDHVKFDHGYTSSSPPVENLLEILHEFDKEQQRAFLQFVTGCPRLPPGG
LASLNPKLTIVRKHGSDSSETDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFH
LS
NT seq 4509 nt   +upstreamnt  +downstreamnt
atggagaacagagggcagaaacgaatggaggatgtggaggagctacctgctgataagaga
gcttgtaactcacaagactctaggtcaagctcatctggtggctcgtctcttcagagccag
tctcaagaagcagccaatggagcgagttcagggcacgaaaccactgacgctgatatggac
acttcttcgtctgactctccttcaagccattcagatggagagccagagaaggaggaggag
gacacggactatggatcttgcgattccgatgatgaagaaggtgaagatccgaggcacaag
gcgcttcaggatgttcagtgggggagatcatctgaggatcagcagaaactgagttctctc
gtgacgagattgagtgaagaagtcgatccttctttgcagttgactggtcttacggagctg
tgtgaagtcttgtctttctgtactgaagactcgctctccaccgttatggccgatacgctc
gcccgggtgcttgttaagttggctaaccatgagagcaatgcagatattatgctgctcgct
atcagagcgattacttacttgtctgatgtttatccgcggtctgtagcattccttgtgaaa
catgagactctccctgctctttgccagagactacaggcaattgagtacttggacgttgct
gagcagtgtttgcaagcacttgagaaaatatccaaagatgagccagtggcgtgcttgaat
gctggagcaattaaagcagtgctttcttatattgatttcttctcaacaagtttacagaga
gtcgcagtttctactgtggtgaatatatgtaggaagctttcatctgagtctccctcgcct
tttatggatgctgttccaattttatgcaatcttcttcagtatgaagatcgacagttggtg
gagagtgtggctatttgcttaacaaaaataacagatcaagttagcgagtcacctgaaatg
ttggatcaactatgtagccatggactgattcatcaatccatacatcttttaaacttgaat
ggccgcactaccctatctcaacctgtttacaatggtgtgattggattgctaagaaaacta
tcttccggttcaactttagccttcagaacgttatatgagcttaacactggctacagacta
aaagaaattatatccacgtatgacatttcccattcagtgtcttctacaaatcccatcact
gcatgttccaaccaggtgcatgaagtcctgaagttggtgattgagcttcttccatctgca
ccggtagaggataatcagctggcattggaaaaggaaagttttcttgtcaatcagcccgat
ctcttgcaacaatttggagcagacgtgcttcctgttatgattcaggtactaaaatctgga
gcgaacgtatatgtttcttatggttgcctatcagcaatccacaagctgacttgcttgagt
aagtcagccgattttgtcgatttactgaagaatgcaaacattttaagtgttttggcgggc
attttgtcaaggaaagatcatcatgtggttgttgtagcactacagattgctgaagtgctt
cttgggaaatacagtgaagattttttgaattcgtttataaaggagggtgtttatttcgca
atcgaagcgcttttaaactcggggcaacagaatcaaggatcagctgacgtttcagaagtg
cctgttccgaaagagactgtgaaatgcttgtgccagtcttttgaaagatcgatttcctct
tcttcacaaacctgtaagattgaaaaggattctgtctacattctcgcaacacgtatcaag
gagagtttctttggacctgaggtattcgactctcagaaaggcttgacagatattctccag
aacctcaagcacttgtctgcagcccttgacgatttgatgactgtacctattgatgcacat
gccctgcacgatgagaagttcttctcagtatggagtcaaatcatggaaaggctgaatgga
agggaatctgtgtccacatttgaatttacagagagtggagttgtgaaggcactggcaaat
tacctgtctaatggactccaccaaaggaaatttagcaaaggcgatccagaatgtgatagt
ttgccatttgttggtaacagatttgaagtgttcacaagatcactttggtctgatggcgag
gcaacttcatccgtattaataaagaagctccaaaattccttatcgtcattagagaactac
ccaattgtcctaagccagtttttgaagcaaaggaactcattcgcgactgttcccaatgga
cgtagcacaagctatccaatcgtaagagttcgttttgtcaaagcagagggggagacttgc
ttgcgtgattactcccaagacttggtcaccgttgacccactttgcttctgggatgctgtc
gatcaatacatgtggcctaaagtgcagttagaacctttagattccgttgaagaaaaagat
caagctatggaatgtccttcttctcagctgcagtcaacttctatatcttgtcaaggtgaa
agctcaacccatatggagattgacagtcctaacgcatctcagttgcagggatctcaagag
gaagaccaagagcagcttccagattcaggggaagagaatacttcctcatctgaagaggag
gatgcgttacctgaggaggatgcgttacctagacttttgtttcgtctagaagggcttgaa
ctagaccgctctttgactgtataccaggctattctcttgcacaaactaaaatcagcaagt
gaaactaccaacgattccaagctgagtggatcccacaccatcacgtatgaaagggcccca
caacttgtagagtctgatgaaaatctgtttcctcccggatctatggacaatgacgagtat
cacccgtttttatccttcttgtttgctcaaagacttggtttgcgccacaaagcaacaaat
cctcctgcgtacgacatattgtttctgctcaagagtctggagggcatgaacagatttctc
tttcacctgatttgtcatgaacggataaatgcttttggggaaggtaggctggagaatttg
gatgatctgagggtgcaggttcgtcctgtgccgtatactgaatttgttagtagtaagcta
acagagaagctggagcagcagctgcgtgattcctttgctgtgtcaacctgcggtctacca
ccgtggtttaatgatctaatgggttcatgcccttttctgtttagttttgaagtcaagacc
aaatacttccggctagcagcattcggttcgcagaaagtccatcatcatccacaacacctt
agcagtgaaggccgcccagtaactggtagtttgcctcgtaaaaagttcttagcttgccgt
gaaaacattctagagtctgcttcaaaaatgatggagttgcacggaaaccaaaaggtggtc
attgaggttgagtacagtgaagaagtgggtactggtcttgggccaacgctggagttctat
acacttgtcagtagagcgtttcaaaatccagaccttggcatgtggaggtgtgatcgtagt
tcctttgatggaaaaccgaaggaagactcaggatttttggtggctccttcaggactcttt
ccacgaccttggtcagatacagcagctgctttcccagatgtgctggagaaatttgtcctc
ttagggacagtggtagcaaaggctttgcatgatagacgagtcttagaccttcctttctcc
aaagccttctataaactgatactcggacaggagttgagttcatttgacatccacttcgtt
gaccctgaactttgtaaaacactggtggaattgcaagctctgacacgtaggaaaaaggtt
ttctcagaatcacaaactgatgcccgagcagccaagtgtgatttgagtttccggggaaca
aatattgaggatctttgtcttgaatttgccctgcctggctacacggactatgttctcact
tctactaatgatatggtaaatatggataacctcgaggaatatatcaaggctattgtcaat
gcaacagtatgtaacggaatccaaaaacaagtggaagcatttcggtctggatttaaaaaa
gtattccctcttgaacatcttgggatatttaatgaagaagaactggaaactctgttgtgt
ggagaacgagatctctttaatatgaatgaagtattggatcacgtcaagtttgatcatgga
tatacttctagcagcccaccagttgaaaatttgttggagattctgcatgagtttgacaag
gagcaacaacgagcctttctgcaatttgtaacaggatgtcctcgtctacctcctgggggc
ttggcgtctctcaatcccaaactaacaattgtccgcaagcatggtagcgattcttcagaa
actgacttgccgagtgtgatgacatgcgctaattatctaaagcttccaccttactcttcc
aaagaaaagatgaaggagaagctaatttatgcaataactgaagggcaaggttccttccat
ctctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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