KEGG   Brassica napus (rape): 106449558
Entry
106449558         CDS       T04128                                 
Name
(RefSeq) polygalacturonase QRT2-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106449558
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106449558
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 106449558
NCBI-ProteinID: XP_013746754
Position
A4:complement(9800264..9803234)
AA seq 421 aa
MDFFMLLTYLFSLFHNNQTGPSHSSPDVNSKIFNVFDYGAIGNGYADDTKAFMDAWEDTC
NYIGSKSTMEIPQGRTFLLQPVGFHGPCKSKKIVFSISGNLTAPYAPYQWKCNEDYCHQW
IEFAHINGLYIDGPGTIDGQGPKWWSLNCKKYEQACHRRPRGMVISHSSNVHISNIVVKD
SPNFQMSLEDSKWIFVKQLTITADGDSPNTDGIHIQRCLNVFVHNSNIHTGDDCISIGDG
SKYVNISGISCGPGHGISIGSLGRNGSKETVENVIVRDCIFRKTDNGVRIKTWQGGRGLV
RNILFERIKLHGVTRPIIIDQFYCPHSQCNNHTDAVEIKNIMYKHIHGTAVKKPFVELLC
SKSVPCRDIYMNDIDILDQEEGKGKKYHKRSSHPPAECINVRGESNGAIKPKLACLDSER
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatttttttatgctcttaacatatcttttttctctcttccacaataatcaaacaggt
ccttctcattcttctcctgatgttaacagtaaaattttcaatgtttttgattatggagca
ataggaaatggatatgccgacgatactaaggcattcatggatgcatgggaagacacatgc
aattacattggatctaaatcaaccatggagattcctcaaggaagaacatttcttcttcag
ccagttgggtttcatggtccttgtaaatccaagaaaatcgttttttcgatcagtggaaac
ctaactgctccttatgctccatatcaatggaaatgcaatgaagattactgtcatcagtgg
atcgaatttgcacatattaatggactttatatcgatggtcctggtacgattgatggccaa
gggccaaaatggtggtcgctaaattgcaaaaagtatgaacaagcatgccacagaagacca
cggggtatggttatatcacattcgagtaatgtgcatataagtaacattgtggttaaagac
agtccaaattttcaaatgtcattggaagattcgaaatggattttcgttaagcaactcacc
ataaccgccgatggtgatagccctaatactgatggcattcacattcaacgttgtctgaat
gtcttcgtacacaatagtaacattcatacaggtgatgattgtatatctattggtgatggt
tcaaagtacgttaatatatcaggaatctcgtgtggtccgggtcatgggataagcatcgga
agcttaggtcgaaatggttctaaagaaacagtggaaaacgttatcgttcgagactgtatc
ttcaggaaaacagataatggagttagaatcaagacatggcagggaggaagaggactagtt
cgaaacattttatttgaacgtataaagctacatggtgtaacccgacctatcatcatcgat
cagttttactgtcctcactcgcaatgcaataaccatactgatgctgtggagatcaagaat
ataatgtacaagcacatacatggaacagcagtgaagaaaccgtttgtggaactactatgc
agcaaatcagttccatgcagagatatatacatgaacgatatagacattcttgaccaagag
gaaggaaaaggaaagaaatatcacaaacgatcgtcacatcctcctgctgaatgcatcaat
gttagaggagagtctaatggtgcgataaagcctaagctagcttgtttagattccgaaaga
cattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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