KEGG   Brassica napus (rape): 106450745
Entry
106450745         CDS       T04128                                 
Name
(RefSeq) putative pectate lyase 2
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106450745
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106450745
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 106450745
NCBI-ProteinID: XP_013747935
UniProt: A0A816KSP3
Position
C5:6119864..6122196
AA seq 416 aa
MIVYCLAHIYVVYIYICSHIVQIKRLHLQAKMASLLLTVSLLFAAFSYPLVEAAYYSNSY
YTTPKPLLNPIDSCWRRNPNWASNRRALADCAVGFGKAAIGGKYGSVYVVTNPSDNPENP
RPGTLRHAVIQSKPLWITFARDMVIVLQNELIMNSYKTIDGRGAKVEIAYGACITVQHLN
HIIIHGISIHDCKPGKSGRVRSSPTHIGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGL
IDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDRIMRVTIAFNHFGPGLIERMPRVRL
GYAHIANNRYEKWQMYAIGGSANPTIFSEGNYFVASDDPSKKQVTKRIESGYDSKRWKWR
TSKDVFKNGAYFVQSGYGTVTPLYGRAEWFPVSHGSLVPSLTSSAGPLRCYSGRTC
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgattgtatattgtctagctcatatatatgtcgtgtatatatatatttgctcacacata
gttcaaatcaagcgtctccatcttcaagcaaaaatggcttctcttttgttaacagtttca
cttctctttgcagctttctcttatcctcttgtagaggctgcttattatagtaatagttac
tacaccaccccaaaaccattactaaacccaatcgattcttgctggcgtagaaaccctaac
tgggcatctaaccgccgcgctctagccgattgcgcggttgggttcggtaaagccgcaata
gggggcaaatacgggtcagtctacgtggttacaaacccatcggacaaccctgaaaaccct
agacctggaaccctaaggcacgccgtgattcaatctaaaccgctatggatcacattcgca
cgtgacatggtcatagtgttgcaaaacgagctcatcatgaacagctacaagactatcgac
ggaagaggagccaaggtggaaatcgcatacggggcatgcataacggtccaacatttgaac
catatcattatacatgggataagtatccatgattgtaaaccgggtaagtcgggtcgggtg
cgcagcagtccgacccatattggaagtaggaaaggatcggacggtgacgcaatcgccata
tttgattcttcacatatttggatcgatcattgtttcttttctcggtgtcaagatggtttg
atcgatgtgcttcatgcttcgacggccgtcactatttctaataattacttcacacagcac
gataaagtgatgttgctcggccataatgacaataatgtggaagatcggattatgcgagtt
acaattgcattcaaccattttggaccgggtctcattgagagaatgcctagagtgaggcta
gggtatgcgcatatagctaacaatagatacgagaagtggcaaatgtatgcaatcggagga
agtgctaatccaactatcttcagcgaaggcaactacttcgttgcttctgatgaccctagc
aaaaaacaggtgacaaagagaatagaaagcggatatgattcgaaaaggtggaaatggaga
acatcaaaagacgttttcaagaacggagcttacttcgtgcagtctggatacggaaccgtc
acgccgttgtacggaagagcagagtggtttccggtgtcccacggctctctcgtcccttct
ctcacttcctccgccggccctctccgttgctactccggcaggacttgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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